| SRR4457256 | 2nd_leaf | DAH20 | 0.70 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.94 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.33 | MC |
| SRR5560727 | caryopsis | wild_type | 0.24 | MC |
| SRR5560728 | caryopsis | wild_type | 0.27 | MC |
| SRR5560729 | caryopsis | wild_type | 0.56 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.38 | MC |
| SRR7265400 | coleoptile | 2dA | 1.82 | MC |
| SRR7265402 | coleoptile | 2dA | 1.07 | MC |
| SRR7265404 | coleoptile | 2dN | 0.79 | MC |
| SRR7265409 | coleoptile | 3dN | 0.83 | MC |
| SRR7265414 | coleoptile | 4dA | 1.44 | MC |
| SRR7265415 | coleoptile | 4dN | 0.66 | MC |
| SRR7265416 | coleoptile | 4dN | 2.44 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.27 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.89 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.77 | MC |
| SRR7265377 | embryo | 1hA | 0.74 | MC |
| SRR7265380 | embryo | 1hN | 0.35 | MC |
| SRR7265382 | embryo | 3hA | 1.01 | MC |
| SRR7265383 | embryo | 3hA | 0.51 | MC |
| SRR7265384 | embryo | 3hA | 0.39 | MC |
| SRR7265386 | embryo | 3hN | 0.49 | MC |
| SRR7265390 | embryo | 12hA | 0.54 | MC |
| SRR7265393 | embryo | 12hN | 0.41 | MC |
| SRR7265394 | embryo | 24hA | 1.38 | MC |
| SRR7265395 | embryo | 24hA | 0.48 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.34 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.72 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.44 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.13 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.87 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.72 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.69 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.40 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.58 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.83 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.48 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.56 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.71 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.39 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.70 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.48 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.60 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.60 | MC |
| SRR1761529 | leaf | drought | 2.60 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.38 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.37 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.89 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.22 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.23 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.39 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.22 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.58 | MC |
| SRR1213692 | leaf | wt | 2.16 | MC |
| SRR1213693 | leaf | wt | 1.75 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.83 | MC |
| SRR5856927 | leaf | control | 0.22 | MC |
| SRR5856930 | leaf | salt | 0.34 | MC |
| SRR5856931 | leaf | salt | 0.46 | MC |
| SRR5856932 | leaf | salt | 1.13 | MC |
| SRR5856933 | leaf | control | 0.28 | MC |
| SRR5856935 | leaf | control | 0.50 | MC |
| SRR5856936 | leaf | salt | 0.46 | MC |
| SRR5856937 | leaf | salt | 0.56 | MC |
| SRR5856938 | leaf | salt | 0.86 | MC |
| SRR6168973 | leaf | none (control) | 0.35 | MC |
| SRR6168975 | leaf | none (control) | 1.07 | MC |
| SRR6168980 | leaf | none (control) | 1.25 | MC |
| SRR5110429 | panicle | Dawn | 1.65 | MC |
| SRR5110430 | panicle | Dawn | 1.14 | MC |
| SRR5110431 | panicle | Dawn | 1.52 | MC |
| SRR5110432 | panicle | Dawn | 1.93 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.65 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.17 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.22 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.64 | MC |
| SRR5110440 | panicle | Dawn + 7h | 2.51 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.16 | MC |
| SRR5110445 | panicle | Dusk | 2.27 | MC |
| SRR5110447 | panicle | Dusk | 2.54 | MC |
| SRR5110448 | panicle | Dusk | 2.34 | MC |
| SRR5110449 | panicle | Dawn + 14h | 2.60 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.67 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.25 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.87 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.08 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.61 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.55 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.74 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.16 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.22 | MC |
| SRR1213695 | root | wt | 2.69 | MC |
| SRR4947482 | root | Al | 0.91 | MC |
| SRR4947490 | root | Al | 1.59 | MC |
| SRR4947491 | root | Al | 1.86 | MC |
| SRR4947497 | root | control | 1.92 | MC |
| SRR4947498 | root | Al | 1.43 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.87 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.79 | MC |
| SRR6441554 | seedling | wild_type | 0.91 | MC |
| SRR6441555 | seedling | wild_type | 1.41 | MC |
| SRR2154082 | seedling | wt | 1.08 | MC |
| SRR2154083 | seedling | wt | 2.85 | MC |
| SRR2154085 | seedling | wt | 1.55 | MC |
| SRR2154087 | seedling | wt | 0.60 | MC |
| SRR3098741 | seedling | wt | 0.37 | MC |
| SRR3098742 | seedling | wt | 0.21 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.59 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.83 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.77 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.29 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.12 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.54 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.40 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.54 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.87 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.84 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.89 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.57 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.49 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.99 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.21 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.06 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.09 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.00 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.87 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.00 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.84 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.92 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.75 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.77 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.60 | MC |