| SRR4457251 | 2nd_leaf | DAH4 | 0.33 | MC |
| SRR5560728 | caryopsis | wild_type | 0.31 | MC |
| SRR4947495 | root | control | 0.74 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.53 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.46 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.67 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.60 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.33 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.69 | MC |
| SRR2338868 | endosprem | high_temperature | 0.64 | MC |
| SRR2338869 | endosprem | high_temperature | 0.62 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.39 | MC |
| SRR8060835 | leaf | wild_type | 0.27 | MC |
| SRR8240824 | leaf | wild_type | 0.77 | MC |
| SRR8240825 | leaf | wild_type | 0.41 | MC |
| SRR8240826 | leaf | wild_type | 0.52 | MC |
| SRR8240820 | leaf | wild_type | 0.23 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.63 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.03 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.25 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.07 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.36 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.38 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.47 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.60 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.20 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.60 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.83 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.03 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.66 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.56 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.58 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.10 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 5.12 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.66 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.31 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.31 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.80 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.54 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.88 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.71 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.63 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.94 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.45 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.01 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.58 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.47 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.44 | MC |
| SRR6417968 | leaf | H2O_control | 0.76 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.40 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.05 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.18 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.37 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.41 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.91 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.78 | MC |
| SRR6502088 | leaf | control | 1.52 | MC |
| SRR6502089 | leaf | control | 1.82 | MC |
| SRR6502090 | leaf | control | 2.23 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.37 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.09 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.75 | MC |
| SRR6502100 | leaf | control | 2.99 | MC |
| SRR6502101 | leaf | control | 2.92 | MC |
| SRR6502102 | leaf | control | 1.62 | MC |
| SRR5856933 | leaf | control | 0.23 | MC |
| SRR6168974 | leaf | none (control) | 0.47 | MC |
| SRR5110431 | panicle | Dawn | 0.54 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.32 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.55 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.84 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.80 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.63 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.51 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.36 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.44 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.85 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.55 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.23 | MC |
| SRR4947478 | root | control | 0.66 | MC |
| SRR4947479 | root | control | 0.89 | MC |
| SRR4947483 | root | Al | 0.45 | MC |
| SRR4947487 | root | control | 1.79 | MC |
| SRR4947488 | root | control | 0.62 | MC |
| SRR4947489 | root | control | 0.46 | MC |
| SRR4947490 | root | Al | 0.60 | MC |
| SRR4947491 | root | Al | 1.88 | MC |
| SRR4947494 | root | control | 0.75 | MC |
| SRR4947499 | root | Al | 0.73 | MC |
| SRR4947502 | root | control | 1.10 | MC |
| SRR4947503 | root | control | 0.83 | MC |
| SRR4947505 | root | control | 0.67 | MC |
| SRR4947506 | root | Al | 0.87 | MC |
| SRR4947507 | root | Al | 0.81 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.49 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.70 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.67 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.47 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.69 | MC |
| SRR6502106 | root | control | 1.16 | MC |
| SRR6502107 | root | control | 1.23 | MC |
| SRR6441554 | seedling | wild_type | 0.55 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.19 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.81 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.46 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 13.16 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.61 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.13 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.89 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.07 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.41 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.48 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.38 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.37 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.30 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.59 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.46 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.36 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.52 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.20 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.14 | MC |