| SRR4457250 | 2nd_leaf | DAH4 | 0.45 | MC |
| SRR5560727 | caryopsis | wild_type | 0.87 | MC |
| SRR5560728 | caryopsis | wild_type | 1.06 | MC |
| SRR5560729 | caryopsis | wild_type | 1.18 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.51 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.18 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.11 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.76 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.78 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.85 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.39 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.01 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.91 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.73 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.09 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.48 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.23 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.13 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.17 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.32 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.48 | MC |
| SRR8240824 | leaf | wild_type | 0.65 | MC |
| SRR8240818 | leaf | wild_type | 0.35 | MC |
| SRR8240820 | leaf | wild_type | 0.42 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.95 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.21 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.54 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.41 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.85 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.70 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.52 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.46 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.42 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.93 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.52 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.57 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.68 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.56 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.76 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.66 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.10 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.22 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.98 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.56 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.23 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.93 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.56 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.23 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.93 | MC |
| SRR1761528 | leaf | drought | 1.56 | MC |
| SRR1761530 | leaf | control | 1.23 | MC |
| SRR1761531 | leaf | control | 2.93 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.88 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.54 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.35 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.79 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.65 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.90 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.46 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.61 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.84 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.36 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.35 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.72 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.37 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.30 | MC |
| SRR1213693 | leaf | wt | 0.85 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.19 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.23 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.46 | MC |
| SRR6502088 | leaf | control | 0.86 | MC |
| SRR6502089 | leaf | control | 1.50 | MC |
| SRR6502090 | leaf | control | 1.60 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.73 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.85 | MC |
| SRR6502102 | leaf | control | 0.46 | MC |
| SRR5856927 | leaf | control | 0.31 | MC |
| SRR5856928 | leaf | control | 0.25 | MC |
| SRR5856933 | leaf | control | 0.32 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 5.17 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.16 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.51 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.31 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 5.33 | MC |
| SRR6168973 | leaf | none (control) | 1.53 | MC |
| SRR6168974 | leaf | none (control) | 1.41 | MC |
| SRR6168975 | leaf | none (control) | 1.57 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.38 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.81 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.30 | MC |
| SRR8582888 | panicle | AM | 0.43 | MC |
| SRR8582889 | panicle | AM | 0.64 | MC |
| SRR8582890 | panicle | AM | 0.31 | MC |
| SRR8582891 | panicle | PM | 2.49 | MC |
| SRR8582893 | panicle | PM | 2.63 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.27 | MC |
| SRR5110437 | panicle | Dawn + 7h | 1.31 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.91 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.45 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.64 | MC |
| SRR5110446 | panicle | Dusk | 0.84 | MC |
| SRR5110447 | panicle | Dusk | 1.03 | MC |
| SRR5110448 | panicle | Dusk | 0.87 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.58 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.55 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.45 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.39 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.57 | MC |
| SRR1633185 | panicle | WT | 0.60 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.35 | MC |
| SRR1213695 | root | wt | 0.47 | MC |
| SRR4947488 | root | control | 0.50 | MC |
| SRR6441554 | seedling | wild_type | 0.67 | MC |
| SRR6441555 | seedling | wild_type | 0.60 | MC |
| SRR2154086 | seedling | wt | 0.58 | MC |
| SRR2154082 | seedling | wt | 0.49 | MC |
| SRR2154083 | seedling | wt | 0.88 | MC |
| SRR2154087 | seedling | wt | 0.36 | MC |
| SRR3098741 | seedling | wt | 0.23 | MC |
| SRR3098742 | seedling | wt | 0.73 | MC |
| SRR3098743 | seedling | wt | 0.56 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.26 | MC |
| SRR1944583 | seedling | no_treatment | 1.30 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.43 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.43 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.43 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.67 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.36 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.33 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.41 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.74 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.74 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.57 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.17 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.76 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.68 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.18 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.58 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.44 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.54 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.74 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.17 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.89 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.59 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.14 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.38 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.88 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.56 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.53 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.78 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.86 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.31 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.05 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.36 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.52 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.48 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.65 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.26 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.93 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.35 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.76 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.06 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.25 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.40 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.90 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.00 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.09 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.33 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.31 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.47 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.63 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.90 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.77 | MC |