| SRR4457254 | 2nd_leaf | DAH12 | 0.36 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.42 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.78 | MC |
| SRR6320473 | carpel | wt | 4.54 | MC |
| SRR6320498 | carpel | wt | 3.27 | MC |
| SRR7265400 | coleoptile | 2dA | 2.71 | MC |
| SRR7265401 | coleoptile | 2dA | 3.25 | MC |
| SRR7265402 | coleoptile | 2dA | 3.66 | MC |
| SRR7265403 | coleoptile | 2dN | 2.86 | MC |
| SRR7265404 | coleoptile | 2dN | 2.53 | MC |
| SRR7265405 | coleoptile | 2dN | 3.06 | MC |
| SRR7265407 | coleoptile | 3dA | 2.85 | MC |
| SRR7265409 | coleoptile | 3dN | 1.69 | MC |
| SRR7265410 | coleoptile | 3dN | 1.88 | MC |
| SRR7265411 | coleoptile | 3dN | 1.67 | MC |
| SRR7265415 | coleoptile | 4dN | 2.80 | MC |
| SRR7265416 | coleoptile | 4dN | 3.29 | MC |
| SRR7265417 | coleoptile | 4dN | 1.91 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.29 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.54 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.37 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.94 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.50 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.55 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.46 | MC |
| SRR7265390 | embryo | 12hA | 3.79 | MC |
| SRR7265392 | embryo | 12hN | 4.37 | MC |
| SRR7265393 | embryo | 12hN | 3.97 | MC |
| SRR7265394 | embryo | 24hA | 4.98 | MC |
| SRR7265395 | embryo | 24hA | 5.02 | MC |
| SRR7265396 | embryo | 24hA | 2.91 | MC |
| SRR7265397 | embryo | 24hN | 3.92 | MC |
| SRR7265399 | embryo | 24hN | 4.15 | MC |
| SRR2338868 | endosprem | high_temperature | 0.62 | MC |
| SRR2338869 | endosprem | high_temperature | 0.95 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.47 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.37 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.54 | MC |
| SRR8060835 | leaf | wild_type | 0.56 | MC |
| SRR8060836 | leaf | wild_type | 0.68 | MC |
| SRR8060837 | leaf | wild_type | 0.21 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.45 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.51 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.54 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.09 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.17 | MC |
| SRR504365 | leaf | wt | 0.42 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.31 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.39 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.26 | MC |
| SRR5856927 | leaf | control | 0.56 | MC |
| SRR5856928 | leaf | control | 0.34 | MC |
| SRR5856929 | leaf | control | 0.62 | MC |
| SRR5856930 | leaf | salt | 0.30 | MC |
| SRR5856931 | leaf | salt | 0.31 | MC |
| SRR5856933 | leaf | control | 0.40 | MC |
| SRR5856935 | leaf | control | 0.25 | MC |
| SRR5856936 | leaf | salt | 0.23 | MC |
| SRR5856937 | leaf | salt | 0.48 | MC |
| SRR5856938 | leaf | salt | 0.41 | MC |
| SRR6168979 | leaf | none (control) | 0.22 | MC |
| SRR5110429 | panicle | Dawn | 1.24 | MC |
| SRR5110431 | panicle | Dawn | 0.64 | MC |
| SRR5110432 | panicle | Dawn | 1.70 | MC |
| SRR4947496 | root | control | 0.56 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.12 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 2.57 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.46 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.82 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.22 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 0.73 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.88 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.46 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.85 | MC |
| SRR5110445 | panicle | Dusk | 0.80 | MC |
| SRR5110446 | panicle | Dusk | 0.36 | MC |
| SRR5110448 | panicle | Dusk | 1.43 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.29 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.64 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.95 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.37 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.26 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.91 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.30 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.66 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.44 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.49 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.18 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.85 | MC |
| SRR1633182 | panicle | WT | 1.09 | MC |
| SRR1633185 | panicle | WT | 2.73 | MC |
| SRR5126147 | root | "mock,1_day" | 0.38 | MC |
| SRR5126148 | root | "mock,1_day" | 0.52 | MC |
| SRR5126149 | root | "mock,1_day" | 0.70 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.39 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.73 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.55 | MC |
| SRR5126155 | root | "mock,7_days" | 0.97 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.44 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.43 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.39 | MC |
| SRR5126165 | root | "mock,14_days" | 0.66 | MC |
| SRR5126167 | root | "mock,14_days" | 0.42 | MC |
| SRR5126169 | root | "mock,14_days" | 0.42 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.59 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.64 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.39 | MC |
| SRR4947478 | root | control | 0.65 | MC |
| SRR4947482 | root | Al | 0.67 | MC |
| SRR4947483 | root | Al | 0.54 | MC |
| SRR4947485 | root | Al | 0.62 | MC |
| SRR4947487 | root | control | 0.73 | MC |
| SRR4947490 | root | Al | 0.77 | MC |
| SRR4947503 | root | control | 0.70 | MC |
| SRR4947506 | root | Al | 0.99 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.97 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.57 | MC |
| SRR6502106 | root | control | 0.64 | MC |
| SRR6502107 | root | control | 0.51 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.42 | MC |
| SRR2154083 | seedling | wt | 0.48 | MC |
| SRR2154087 | seedling | wt | 0.47 | MC |
| SRR3098741 | seedling | wt | 0.61 | MC |
| SRR3098743 | seedling | wt | 0.18 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.47 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.28 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.15 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.80 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.91 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.00 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.58 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.58 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.38 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.37 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.03 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.77 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.44 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.43 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.40 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.73 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.54 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.22 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.32 | MC |