| SRR4457255 | 2nd_leaf | DAH20 | 4.69 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 4.02 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 4.83 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 4.32 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 5.97 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.88 | MC |
| SRR6320473 | carpel | wt | 1.46 | MC |
| SRR5560727 | caryopsis | wild_type | 3.99 | MC |
| SRR5560728 | caryopsis | wild_type | 3.56 | MC |
| SRR7265406 | coleoptile | 3dA | 1.88 | MC |
| SRR7265407 | coleoptile | 3dA | 2.29 | MC |
| SRR7265408 | coleoptile | 3dA | 1.77 | MC |
| SRR7265409 | coleoptile | 3dN | 2.48 | MC |
| SRR7265410 | coleoptile | 3dN | 2.72 | MC |
| SRR7265411 | coleoptile | 3dN | 3.09 | MC |
| SRR7265412 | coleoptile | 4dA | 2.16 | MC |
| SRR7265413 | coleoptile | 4dA | 3.47 | MC |
| SRR7265414 | coleoptile | 4dA | 2.38 | MC |
| SRR7265415 | coleoptile | 4dN | 2.24 | MC |
| SRR7265416 | coleoptile | 4dN | 2.80 | MC |
| SRR7265417 | coleoptile | 4dN | 2.76 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 4.03 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 4.02 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.08 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.78 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.41 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.37 | MC |
| SRR7265379 | embryo | 1hN | 3.12 | MC |
| SRR7265381 | embryo | 1hN | 2.90 | MC |
| SRR7265385 | embryo | 3hN | 3.31 | MC |
| SRR2338866 | endosprem | control | 2.09 | MC |
| SRR976168 | flag_leaf | wild_type | 2.39 | MC |
| SRR4457248 | flag_leaf | DAH44 | 5.69 | MC |
| SRR1213691 | flower | wt | 3.90 | MC |
| SRR8240820 | leaf | wild_type | 2.36 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.38 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.42 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.72 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.57 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.94 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.48 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.73 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.99 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.52 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.55 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.66 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.52 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.13 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.76 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.43 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.33 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.13 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.82 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.67 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.30 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.78 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.46 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.07 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.08 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.09 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.23 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.43 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.84 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.83 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.38 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.08 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.85 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.09 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.17 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.59 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.02 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.85 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.33 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.59 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.02 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.85 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.33 | MC |
| SRR1761528 | leaf | drought | 1.59 | MC |
| SRR1761529 | leaf | drought | 1.02 | MC |
| SRR1761530 | leaf | control | 2.85 | MC |
| SRR1761531 | leaf | control | 2.33 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.82 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.46 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.60 | MC |
| SRR6417967 | leaf | H2O_control | 1.99 | MC |
| SRR6417968 | leaf | H2O_control | 3.28 | MC |
| SRR6417969 | leaf | H2O_control | 2.94 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 3.21 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.84 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.41 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.18 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.44 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 3.21 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.51 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.84 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 4.18 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.43 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.45 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 4.80 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.89 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.85 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 3.65 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 5.29 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 4.12 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.29 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 6.30 | MC |
| SRR6168979 | leaf | none (control) | 0.20 | MC |
| SRR6168981 | leaf | none (control) | 0.48 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.28 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.19 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.40 | MC |
| SRR8582888 | panicle | AM | 0.56 | MC |
| SRR8582889 | panicle | AM | 0.46 | MC |
| SRR8582890 | panicle | AM | 0.73 | MC |
| SRR8582891 | panicle | PM | 2.41 | MC |
| SRR8582892 | panicle | PM | 1.81 | MC |
| SRR8582893 | panicle | PM | 3.66 | MC |
| SRR4947496 | root | control | 2.23 | MC |
| SRR5110440 | panicle | Dawn + 7h | 5.47 | MC |
| SRR1633182 | panicle | WT | 2.80 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.74 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.91 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.18 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.93 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.68 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.65 | MC |
| SRR5126157 | root | "mock,7_days" | 4.68 | MC |
| SRR1213695 | root | wt | 2.19 | MC |
| SRR4947478 | root | control | 4.66 | MC |
| SRR4947480 | root | control | 2.30 | MC |
| SRR4947481 | root | control | 2.58 | MC |
| SRR4947482 | root | Al | 3.40 | MC |
| SRR4947484 | root | Al | 3.16 | MC |
| SRR4947485 | root | Al | 4.29 | MC |
| SRR4947487 | root | control | 3.92 | MC |
| SRR4947488 | root | control | 3.25 | MC |
| SRR4947489 | root | control | 3.99 | MC |
| SRR4947490 | root | Al | 3.87 | MC |
| SRR4947492 | root | Al | 4.55 | MC |
| SRR4947493 | root | Al | 3.34 | MC |
| SRR4947494 | root | control | 4.03 | MC |
| SRR4947497 | root | control | 4.09 | MC |
| SRR4947500 | root | Al | 3.99 | MC |
| SRR4947501 | root | Al | 5.20 | MC |
| SRR4947502 | root | control | 5.36 | MC |
| SRR4947503 | root | control | 3.38 | MC |
| SRR4947504 | root | control | 2.63 | MC |
| SRR4947505 | root | control | 3.87 | MC |
| SRR4947508 | root | Al | 3.41 | MC |
| SRR4947509 | root | Al | 3.14 | MC |
| SRR2154085 | seedling | wt | 3.87 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.25 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.86 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.46 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.30 | MC |
| SRR358791 | seedling | wt | 5.09 | MC |
| SRR358792 | seedling | wt | 4.49 | MC |
| SRR358793 | seedling | wt | 5.36 | MC |
| SRR358794 | seedling | wt | 3.26 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.59 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.91 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.78 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.99 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.44 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.73 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.11 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.25 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.91 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.55 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.55 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.27 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.86 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.69 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.79 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.52 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.70 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.04 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.61 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 7.64 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 9.33 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 7.42 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 6.88 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 7.83 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 7.01 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 4.92 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 2.25 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.60 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.86 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.23 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.48 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 3.36 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 4.43 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.07 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 4.67 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.81 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.44 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.48 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.03 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 2.01 | MC |