| SRR4457251 | 2nd_leaf | DAH4 | 0.49 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.43 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.35 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.46 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.76 | MC |
| SRR6320498 | carpel | wt | 1.93 | MC |
| SRR5560727 | caryopsis | wild_type | 0.60 | MC |
| SRR5560728 | caryopsis | wild_type | 1.86 | MC |
| SRR5560729 | caryopsis | wild_type | 1.25 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.67 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.21 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.84 | MC |
| SRR7265400 | coleoptile | 2dA | 1.83 | MC |
| SRR7265401 | coleoptile | 2dA | 1.22 | MC |
| SRR7265402 | coleoptile | 2dA | 1.40 | MC |
| SRR7265403 | coleoptile | 2dN | 2.68 | MC |
| SRR7265404 | coleoptile | 2dN | 2.04 | MC |
| SRR7265405 | coleoptile | 2dN | 2.92 | MC |
| SRR7265406 | coleoptile | 3dA | 1.14 | MC |
| SRR7265407 | coleoptile | 3dA | 1.64 | MC |
| SRR7265409 | coleoptile | 3dN | 2.16 | MC |
| SRR7265410 | coleoptile | 3dN | 2.35 | MC |
| SRR7265411 | coleoptile | 3dN | 2.14 | MC |
| SRR7265413 | coleoptile | 4dA | 1.16 | MC |
| SRR7265415 | coleoptile | 4dN | 3.13 | MC |
| SRR7265416 | coleoptile | 4dN | 2.10 | MC |
| SRR7265417 | coleoptile | 4dN | 1.63 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.34 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.72 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.36 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.38 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.61 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.99 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.69 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.58 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.66 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.97 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.80 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.65 | MC |
| SRR7265376 | embryo | 1hA | 3.43 | MC |
| SRR7265377 | embryo | 1hA | 3.26 | MC |
| SRR7265378 | embryo | 1hA | 2.85 | MC |
| SRR7265382 | embryo | 3hA | 1.59 | MC |
| SRR7265383 | embryo | 3hA | 1.43 | MC |
| SRR7265384 | embryo | 3hA | 1.65 | MC |
| SRR7265385 | embryo | 3hN | 3.15 | MC |
| SRR7265386 | embryo | 3hN | 2.90 | MC |
| SRR7265387 | embryo | 3hN | 2.07 | MC |
| SRR7265388 | embryo | 12hA | 2.17 | MC |
| SRR7265389 | embryo | 12hA | 2.85 | MC |
| SRR7265390 | embryo | 12hA | 2.75 | MC |
| SRR7265391 | embryo | 12hN | 1.67 | MC |
| SRR7265392 | embryo | 12hN | 2.15 | MC |
| SRR7265393 | embryo | 12hN | 2.87 | MC |
| SRR7265394 | embryo | 24hA | 4.12 | MC |
| SRR7265395 | embryo | 24hA | 2.09 | MC |
| SRR7265396 | embryo | 24hA | 1.65 | MC |
| SRR7265397 | embryo | 24hN | 3.16 | MC |
| SRR7265398 | embryo | 24hN | 3.30 | MC |
| SRR7265399 | embryo | 24hN | 1.92 | MC |
| SRR2338866 | endosprem | control | 1.85 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.33 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.27 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.46 | MC |
| SRR1213691 | flower | wt | 0.84 | MC |
| SRR8060835 | leaf | wild_type | 1.67 | MC |
| SRR8060836 | leaf | wild_type | 0.47 | MC |
| SRR8060837 | leaf | wild_type | 1.12 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.38 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.38 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.72 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.27 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.44 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.24 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.44 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.44 | MC |
| SRR1761530 | leaf | control | 0.44 | MC |
| SRR504365 | leaf | wt | 0.91 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.42 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.22 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.48 | MC |
| SRR1213693 | leaf | wt | 0.36 | MC |
| SRR5856927 | leaf | control | 0.72 | MC |
| SRR5856928 | leaf | control | 0.98 | MC |
| SRR5856929 | leaf | control | 1.34 | MC |
| SRR5856930 | leaf | salt | 0.40 | MC |
| SRR5856931 | leaf | salt | 0.33 | MC |
| SRR5856933 | leaf | control | 1.87 | MC |
| SRR5856934 | leaf | control | 0.77 | MC |
| SRR5856935 | leaf | control | 0.77 | MC |
| SRR5856936 | leaf | salt | 0.76 | MC |
| SRR5856937 | leaf | salt | 0.53 | MC |
| SRR5856938 | leaf | salt | 0.82 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.31 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.15 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.68 | MC |
| SRR6168974 | leaf | none (control) | 0.63 | MC |
| SRR6168975 | leaf | none (control) | 0.76 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.77 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 2.07 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.31 | MC |
| SRR5110429 | panicle | Dawn | 1.38 | MC |
| SRR5110431 | panicle | Dawn | 1.43 | MC |
| SRR4947496 | root | control | 0.65 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.62 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.67 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.77 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.75 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.58 | MC |
| SRR5110445 | panicle | Dusk | 4.37 | MC |
| SRR5110446 | panicle | Dusk | 1.04 | MC |
| SRR5110447 | panicle | Dusk | 1.25 | MC |
| SRR5110448 | panicle | Dusk | 1.22 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.42 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.94 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.02 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.47 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.14 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.48 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.29 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.15 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.83 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.38 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.49 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.85 | MC |
| SRR5126148 | root | "mock,1_day" | 0.32 | MC |
| SRR5126149 | root | "mock,1_day" | 0.50 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.49 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.69 | MC |
| SRR5126153 | root | "mock,7_days" | 1.02 | MC |
| SRR5126155 | root | "mock,7_days" | 0.66 | MC |
| SRR5126157 | root | "mock,7_days" | 0.51 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.23 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.09 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.78 | MC |
| SRR5126165 | root | "mock,14_days" | 1.17 | MC |
| SRR5126167 | root | "mock,14_days" | 0.57 | MC |
| SRR5126169 | root | "mock,14_days" | 0.54 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.65 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.10 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.21 | MC |
| SRR4947485 | root | Al | 1.10 | MC |
| SRR4947490 | root | Al | 0.63 | MC |
| SRR4947493 | root | Al | 0.83 | MC |
| SRR4947497 | root | control | 0.91 | MC |
| SRR4947504 | root | control | 2.21 | MC |
| SRR4947506 | root | Al | 0.90 | MC |
| SRR4947508 | root | Al | 1.05 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.53 | MC |
| SRR6502106 | root | control | 0.64 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.20 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.60 | MC |
| SRR6441554 | seedling | wild_type | 0.61 | MC |
| SRR2154083 | seedling | wt | 0.49 | MC |
| SRR2154087 | seedling | wt | 0.43 | MC |
| SRR3098741 | seedling | wt | 0.40 | MC |
| SRR3098742 | seedling | wt | 0.27 | MC |
| SRR3098743 | seedling | wt | 0.81 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.93 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.65 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 2.14 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.47 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 0.91 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.02 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.74 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.83 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.18 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.28 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.09 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.46 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 2.20 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.98 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.98 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.44 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.75 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.59 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.76 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.06 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.49 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.96 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.43 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.08 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.70 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 2.71 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.72 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.91 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.03 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 2.59 | MC |