| SRR4457255 | 2nd_leaf | DAH20 | 0.53 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.68 | MC |
| SRR6320498 | carpel | wt | 1.52 | MC |
| SRR4947495 | root | control | 0.73 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.05 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.48 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.59 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.06 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.70 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.52 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.73 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.51 | MC |
| SRR2338867 | endosprem | control | 0.47 | MC |
| SRR2338868 | endosprem | high_temperature | 0.50 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.25 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.36 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.20 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.44 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.06 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.39 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.34 | MC |
| SRR8060835 | leaf | wild_type | 2.49 | MC |
| SRR8060837 | leaf | wild_type | 2.61 | MC |
| SRR8240825 | leaf | wild_type | 0.39 | MC |
| SRR8240826 | leaf | wild_type | 0.42 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.23 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.43 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.57 | MC |
| SRR1761529 | leaf | drought | 0.50 | MC |
| SRR504365 | leaf | wt | 0.27 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.35 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.53 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.28 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.73 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.58 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.48 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.32 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.30 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.92 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.95 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.36 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.98 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.25 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.24 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.48 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.06 | MC |
| SRR1213693 | leaf | wt | 0.30 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.01 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.45 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.17 | MC |
| SRR6502088 | leaf | control | 0.54 | MC |
| SRR6502089 | leaf | control | 0.80 | MC |
| SRR6502090 | leaf | control | 0.94 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.36 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.63 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.74 | MC |
| SRR6502100 | leaf | control | 0.75 | MC |
| SRR6502101 | leaf | control | 0.82 | MC |
| SRR6502102 | leaf | control | 1.11 | MC |
| SRR5856927 | leaf | control | 0.40 | MC |
| SRR5856929 | leaf | control | 0.29 | MC |
| SRR5856930 | leaf | salt | 0.43 | MC |
| SRR5856932 | leaf | salt | 0.29 | MC |
| SRR5856933 | leaf | control | 0.22 | MC |
| SRR5856936 | leaf | salt | 0.16 | MC |
| SRR5856937 | leaf | salt | 0.26 | MC |
| SRR5856938 | leaf | salt | 0.58 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.46 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 6.24 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.54 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 3.60 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 4.47 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.17 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.68 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.99 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.31 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.60 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.60 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.69 | MC |
| SRR8582889 | panicle | AM | 0.34 | MC |
| SRR8582890 | panicle | AM | 0.29 | MC |
| SRR5110429 | panicle | Dawn | 0.72 | MC |
| SRR5110430 | panicle | Dawn | 0.72 | MC |
| SRR5110431 | panicle | Dawn | 0.84 | MC |
| SRR5110432 | panicle | Dawn | 1.37 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.37 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.22 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.06 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 2.58 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.99 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.25 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.39 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.04 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.54 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.96 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.39 | MC |
| SRR5110446 | panicle | Dusk | 0.72 | MC |
| SRR5110447 | panicle | Dusk | 1.08 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.23 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.48 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.80 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 2.43 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.08 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.92 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.56 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.82 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.17 | MC |
| SRR1213695 | root | wt | 0.19 | MC |
| SRR4947479 | root | control | 0.48 | MC |
| SRR4947482 | root | Al | 0.63 | MC |
| SRR4947483 | root | Al | 0.69 | MC |
| SRR4947487 | root | control | 0.73 | MC |
| SRR4947490 | root | Al | 0.79 | MC |
| SRR4947494 | root | control | 1.01 | MC |
| SRR4947498 | root | Al | 0.50 | MC |
| SRR4947499 | root | Al | 0.70 | MC |
| SRR4947502 | root | control | 1.67 | MC |
| SRR4947503 | root | control | 1.36 | MC |
| SRR4947507 | root | Al | 1.70 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.52 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.47 | MC |
| SRR6502106 | root | control | 0.43 | MC |
| SRR6502107 | root | control | 0.62 | MC |
| SRR6502108 | root | control | 0.70 | MC |
| SRR2154082 | seedling | wt | 2.30 | MC |
| SRR2154083 | seedling | wt | 2.27 | MC |
| SRR2154084 | seedling | wt | 2.27 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.70 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.94 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.68 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.99 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 2.92 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.30 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.47 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.40 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.39 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.41 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.30 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.56 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.34 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.46 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.43 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.47 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.30 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.39 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.44 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.50 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.29 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.39 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.50 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.82 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.86 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.03 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.70 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.50 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.61 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.42 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.65 | MC |