| SRR6320473 | carpel | wt | 2.39 | MC |
| SRR6320498 | carpel | wt | 3.21 | MC |
| SRR7265406 | coleoptile | 3dA | 1.62 | MC |
| SRR7265407 | coleoptile | 3dA | 0.86 | MC |
| SRR7265408 | coleoptile | 3dA | 0.54 | MC |
| SRR7265412 | coleoptile | 4dA | 2.71 | MC |
| SRR7265413 | coleoptile | 4dA | 3.74 | MC |
| SRR7265414 | coleoptile | 4dA | 2.13 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.16 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.38 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 2.01 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.82 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.72 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.12 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.43 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.88 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.74 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.72 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.64 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.32 | MC |
| SRR8060835 | leaf | wild_type | 0.33 | MC |
| SRR8060836 | leaf | wild_type | 0.86 | MC |
| SRR8060837 | leaf | wild_type | 0.47 | MC |
| SRR504365 | leaf | wt | 0.24 | MC |
| SRR5856927 | leaf | control | 2.07 | MC |
| SRR5856928 | leaf | control | 1.04 | MC |
| SRR5856929 | leaf | control | 1.82 | MC |
| SRR5856930 | leaf | salt | 0.40 | MC |
| SRR5856931 | leaf | salt | 0.54 | MC |
| SRR5856932 | leaf | salt | 0.66 | MC |
| SRR5856933 | leaf | control | 0.87 | MC |
| SRR5856934 | leaf | control | 1.13 | MC |
| SRR5856935 | leaf | control | 1.28 | MC |
| SRR5856936 | leaf | salt | 0.99 | MC |
| SRR5856937 | leaf | salt | 0.63 | MC |
| SRR5856938 | leaf | salt | 1.10 | MC |
| SRR5110430 | panicle | Dawn | 0.63 | MC |
| SRR5126147 | root | "mock,1_day" | 1.21 | MC |
| SRR5126148 | root | "mock,1_day" | 1.91 | MC |
| SRR5126149 | root | "mock,1_day" | 2.03 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.13 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.91 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.63 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.99 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.65 | MC |
| SRR5126165 | root | "mock,14_days" | 3.05 | MC |
| SRR5126167 | root | "mock,14_days" | 2.65 | MC |
| SRR5126169 | root | "mock,14_days" | 4.24 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.19 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.21 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.51 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.91 | MC |
| SRR4947483 | root | Al | 4.04 | MC |
| SRR4947491 | root | Al | 1.18 | MC |
| SRR4947498 | root | Al | 2.03 | MC |
| SRR4947507 | root | Al | 4.76 | MC |
| SRR6502091 | root | 100 mM NaCl | 2.57 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.74 | MC |
| SRR6502093 | root | 100 mM NaCl | 2.86 | MC |
| SRR6502094 | root | control | 1.98 | MC |
| SRR6502095 | root | control | 2.35 | MC |
| SRR6502096 | root | control | 2.59 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.90 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.54 | MC |
| SRR6502106 | root | control | 3.34 | MC |
| SRR6502107 | root | control | 3.90 | MC |
| SRR6502108 | root | control | 3.94 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.19 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.23 | MC |
| SRR2154086 | seedling | wt | 0.80 | MC |
| SRR2154082 | seedling | wt | 1.39 | MC |
| SRR2154083 | seedling | wt | 1.41 | MC |
| SRR2154084 | seedling | wt | 0.88 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.55 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.87 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.50 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.67 | MC |