| SRR4457249 | 2nd_leaf | DAH4 | 0.71 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.62 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.37 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.84 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.75 | MC |
| SRR358796 | callus | wt | 2.13 | MC |
| SRR6320498 | carpel | wt | 1.40 | MC |
| SRR7265406 | coleoptile | 3dA | 1.70 | MC |
| SRR7265415 | coleoptile | 4dN | 2.35 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.61 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.34 | MC |
| SRR7265391 | embryo | 12hN | 1.85 | MC |
| SRR7265397 | embryo | 24hN | 4.01 | MC |
| SRR2338867 | endosprem | control | 0.90 | MC |
| SRR2338869 | endosprem | high_temperature | 0.64 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.35 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.31 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.44 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.30 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.20 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.87 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.61 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.60 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.65 | MC |
| SRR4457248 | flag_leaf | DAH44 | 0.74 | MC |
| SRR1213691 | flower | wt | 0.65 | MC |
| SRR8060836 | leaf | wild_type | 0.45 | MC |
| SRR8060837 | leaf | wild_type | 0.26 | MC |
| SRR8240819 | leaf | wild_type | 0.44 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.53 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.70 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.63 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.34 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.11 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.27 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.62 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.97 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.90 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.04 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.23 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.85 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.49 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.36 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.48 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.48 | MC |
| SRR1761529 | leaf | drought | 0.48 | MC |
| SRR504365 | leaf | wt | 0.62 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.62 | MC |
| SRR6417968 | leaf | H2O_control | 0.46 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.24 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.92 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.37 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.23 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.89 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.55 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.77 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.68 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.31 | MC |
| SRR1213692 | leaf | wt | 0.60 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.43 | MC |
| SRR5856928 | leaf | control | 0.20 | MC |
| SRR5856931 | leaf | salt | 0.32 | MC |
| SRR5856937 | leaf | salt | 0.18 | MC |
| SRR8582888 | panicle | AM | 0.40 | MC |
| SRR8582889 | panicle | AM | 0.28 | MC |
| SRR8582890 | panicle | AM | 0.31 | MC |
| SRR8582892 | panicle | PM | 1.06 | MC |
| SRR5110431 | panicle | Dawn | 0.56 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.63 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.66 | MC |
| SRR5110445 | panicle | Dusk | 0.89 | MC |
| SRR5110446 | panicle | Dusk | 0.39 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.35 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.31 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.54 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.36 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.12 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.80 | MC |
| SRR5126147 | root | "mock,1_day" | 0.54 | MC |
| SRR5126148 | root | "mock,1_day" | 0.37 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.35 | MC |
| SRR4947481 | root | control | 0.98 | MC |
| SRR4947488 | root | control | 1.02 | MC |
| SRR4947498 | root | Al | 0.47 | MC |
| SRR6502096 | root | control | 0.37 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.55 | MC |
| SRR6502106 | root | control | 0.51 | MC |
| SRR6502107 | root | control | 0.28 | MC |
| SRR6502108 | root | control | 0.34 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.37 | MC |
| SRR6441554 | seedling | wild_type | 0.30 | MC |
| SRR2154086 | seedling | wt | 0.73 | MC |
| SRR2154082 | seedling | wt | 0.46 | MC |
| SRR2154083 | seedling | wt | 0.44 | MC |
| SRR3098742 | seedling | wt | 0.24 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.88 | MC |
| SRR1944583 | seedling | no_treatment | 0.59 | MC |
| SRR358792 | seedling | wt | 1.36 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.08 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 5.98 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.41 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.22 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.65 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.72 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.81 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.35 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.27 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.63 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.57 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.67 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.45 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.61 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.60 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 4.06 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.17 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.14 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.57 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.44 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.56 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.52 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.23 | MC |