| SRR4457255 | 2nd_leaf | DAH20 | 0.43 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.04 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.26 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.40 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.46 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.58 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.96 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.58 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.47 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.52 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.44 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.73 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.06 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.28 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.23 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.28 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.53 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.53 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.68 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.33 | MC |
| SRR1213691 | flower | wt | 0.48 | MC |
| SRR8060835 | leaf | wild_type | 1.01 | MC |
| SRR8060836 | leaf | wild_type | 0.40 | MC |
| SRR8060837 | leaf | wild_type | 0.84 | MC |
| SRR8240824 | leaf | wild_type | 1.11 | MC |
| SRR8240825 | leaf | wild_type | 1.09 | MC |
| SRR8240826 | leaf | wild_type | 1.61 | MC |
| SRR8240818 | leaf | wild_type | 0.35 | MC |
| SRR8240819 | leaf | wild_type | 0.61 | MC |
| SRR8240820 | leaf | wild_type | 1.29 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.36 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.64 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.52 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.58 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.03 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.92 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.78 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.96 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.62 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.10 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.68 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.65 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.50 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.82 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.79 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.87 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.86 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.08 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.44 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.77 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.62 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.59 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.97 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.52 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.53 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.00 | MC |
| SRR504365 | leaf | wt | 0.70 | MC |
| SRR6417967 | leaf | H2O_control | 0.65 | MC |
| SRR6417968 | leaf | H2O_control | 1.67 | MC |
| SRR6417969 | leaf | H2O_control | 1.85 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.71 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.90 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.49 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.34 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.27 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.23 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.11 | MC |
| SRR1213692 | leaf | wt | 1.47 | MC |
| SRR1213693 | leaf | wt | 0.36 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.72 | MC |
| SRR6502089 | leaf | control | 1.36 | MC |
| SRR6502090 | leaf | control | 1.61 | MC |
| SRR5856927 | leaf | control | 0.24 | MC |
| SRR5856935 | leaf | control | 0.27 | MC |
| SRR6168973 | leaf | none (control) | 4.35 | MC |
| SRR6168975 | leaf | none (control) | 4.81 | MC |
| SRR6168979 | leaf | none (control) | 1.04 | MC |
| SRR6168981 | leaf | none (control) | 0.31 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.31 | MC |
| SRR8582888 | panicle | AM | 2.05 | MC |
| SRR8582890 | panicle | AM | 0.86 | MC |
| SRR8582891 | panicle | PM | 1.25 | MC |
| SRR8582892 | panicle | PM | 1.63 | MC |
| SRR8582893 | panicle | PM | 1.94 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.34 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.34 | MC |
| SRR1213695 | root | wt | 0.27 | MC |
| SRR4947483 | root | Al | 0.47 | MC |
| SRR4947488 | root | control | 0.47 | MC |
| SRR4947489 | root | control | 0.56 | MC |
| SRR4947498 | root | Al | 0.47 | MC |
| SRR4947507 | root | Al | 0.73 | MC |
| SRR6441554 | seedling | wild_type | 1.16 | MC |
| SRR6441555 | seedling | wild_type | 0.38 | MC |
| SRR2154086 | seedling | wt | 0.79 | MC |
| SRR2154083 | seedling | wt | 0.76 | MC |
| SRR2154084 | seedling | wt | 0.69 | MC |
| SRR2154085 | seedling | wt | 0.37 | MC |
| SRR2154087 | seedling | wt | 1.12 | MC |
| SRR3098741 | seedling | wt | 0.80 | MC |
| SRR3098742 | seedling | wt | 0.95 | MC |
| SRR3098743 | seedling | wt | 0.43 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.27 | MC |
| SRR1944583 | seedling | no_treatment | 2.36 | MC |
| SRR358794 | seedling | wt | 1.32 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.53 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.24 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.10 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.38 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.71 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.26 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.46 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.67 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.20 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.24 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.25 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.58 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.01 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.74 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.08 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.85 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.21 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.65 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.51 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.65 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.64 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.99 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.68 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.26 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.33 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.44 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.62 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.55 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.47 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.37 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.57 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.80 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.39 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.67 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.25 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.25 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.97 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.50 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.63 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.54 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.49 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.78 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.30 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.51 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.22 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.67 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.59 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.95 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.40 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.87 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.73 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.04 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.03 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.64 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.21 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.74 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.36 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.42 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.53 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.57 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.46 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.31 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.31 | MC |