| SRR3745125 | anther | wt | 0.99 | MC |
| SRR3745126 | anther | wt | 1.18 | MC |
| SRR3745127 | anther | wt | 1.02 | MC |
| SRR5560728 | caryopsis | wild_type | 3.99 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.52 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.13 | MC |
| SRR7265400 | coleoptile | 2dA | 0.99 | MC |
| SRR7265401 | coleoptile | 2dA | 1.32 | MC |
| SRR7265402 | coleoptile | 2dA | 0.83 | MC |
| SRR7265403 | coleoptile | 2dN | 1.36 | MC |
| SRR7265404 | coleoptile | 2dN | 0.82 | MC |
| SRR7265405 | coleoptile | 2dN | 0.43 | MC |
| SRR7265406 | coleoptile | 3dA | 3.34 | MC |
| SRR7265407 | coleoptile | 3dA | 1.95 | MC |
| SRR7265408 | coleoptile | 3dA | 0.68 | MC |
| SRR7265410 | coleoptile | 3dN | 1.45 | MC |
| SRR7265411 | coleoptile | 3dN | 1.13 | MC |
| SRR7265413 | coleoptile | 4dA | 2.96 | MC |
| SRR7265414 | coleoptile | 4dA | 3.25 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.03 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.58 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.49 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.62 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.24 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.43 | MC |
| SRR7265376 | embryo | 1hA | 0.46 | MC |
| SRR7265378 | embryo | 1hA | 0.33 | MC |
| SRR7265384 | embryo | 3hA | 0.93 | MC |
| SRR7265386 | embryo | 3hN | 0.44 | MC |
| SRR7265388 | embryo | 12hA | 0.60 | MC |
| SRR7265389 | embryo | 12hA | 1.97 | MC |
| SRR7265390 | embryo | 12hA | 1.97 | MC |
| SRR7265391 | embryo | 12hN | 0.85 | MC |
| SRR7265392 | embryo | 12hN | 1.87 | MC |
| SRR7265393 | embryo | 12hN | 1.14 | MC |
| SRR7265394 | embryo | 24hA | 1.32 | MC |
| SRR7265395 | embryo | 24hA | 3.94 | MC |
| SRR7265396 | embryo | 24hA | 0.96 | MC |
| SRR7265397 | embryo | 24hN | 2.00 | MC |
| SRR7265399 | embryo | 24hN | 0.70 | MC |
| SRR2338868 | endosprem | high_temperature | 1.99 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.94 | MC |
| SRR8060837 | leaf | wild_type | 0.97 | MC |
| SRR8240824 | leaf | wild_type | 1.29 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.08 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.63 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.57 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.96 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.74 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 4.89 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.07 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.81 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.64 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.54 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.78 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.35 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.51 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.55 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.02 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.69 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.09 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.91 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.62 | MC |
| SRR504365 | leaf | wt | 3.68 | MC |
| SRR6417968 | leaf | H2O_control | 2.21 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.79 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.14 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.69 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.96 | MC |
| SRR8611900 | leaf | Non-inoculated | 3.67 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.16 | MC |
| SRR6502089 | leaf | control | 2.29 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.85 | MC |
| SRR6502100 | leaf | control | 2.43 | MC |
| SRR5856935 | leaf | control | 2.03 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 6.85 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.33 | MC |
| SRR6168974 | leaf | none (control) | 2.66 | MC |
| SRR6168975 | leaf | none (control) | 1.53 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.76 | MC |
| SRR6168981 | leaf | none (control) | 1.78 | MC |
| SRR8582889 | panicle | AM | 0.85 | MC |
| SRR8582890 | panicle | AM | 1.12 | MC |
| SRR8582891 | panicle | PM | 3.98 | MC |
| SRR8582892 | panicle | PM | 0.95 | MC |
| SRR5110430 | panicle | Dawn | 3.43 | MC |
| SRR5110431 | panicle | Dawn | 1.99 | MC |
| SRR5110432 | panicle | Dawn | 2.27 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.09 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.97 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.86 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.19 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.94 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.99 | MC |
| SRR5110446 | panicle | Dusk | 0.53 | MC |
| SRR5110448 | panicle | Dusk | 0.93 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.73 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.03 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.09 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.29 | MC |
| SRR5110458 | panicle | Dawn + 21h | 3.07 | MC |
| SRR5110459 | panicle | Dawn + 21h | 1.26 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.33 | MC |
| SRR1633182 | panicle | WT | 2.16 | MC |
| SRR1633185 | panicle | WT | 3.03 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 4.23 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.60 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.63 | MC |
| SRR6502093 | root | 100 mM NaCl | 4.92 | MC |
| SRR6502096 | root | control | 0.83 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.57 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.46 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.28 | MC |
| SRR6441554 | seedling | wild_type | 1.35 | MC |
| SRR2154082 | seedling | wt | 3.22 | MC |
| SRR2154083 | seedling | wt | 1.43 | MC |
| SRR2857719 | seedling | drought_stress_0h | 4.23 | MC |
| SRR1944583 | seedling | no_treatment | 4.45 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.65 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.07 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.44 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.18 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.78 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.16 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.96 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.00 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.56 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 7.19 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 4.93 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 4.05 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 6.00 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 3.22 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 5.64 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.59 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.79 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 6.03 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 5.42 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.29 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 4.24 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.86 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 7.84 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.48 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.70 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.16 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.83 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.65 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.06 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.60 | MC |