| SRR4457249 | 2nd_leaf | DAH4 | 4.35 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.32 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.46 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.76 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.67 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.63 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.62 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.17 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 4.01 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.31 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.42 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 2.04 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 4.16 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 4.00 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.60 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 6.29 | MC |
| SRR3745125 | anther | wt | 2.35 | MC |
| SRR6320498 | carpel | wt | 3.27 | MC |
| SRR5560727 | caryopsis | wild_type | 2.90 | MC |
| SRR5560729 | caryopsis | wild_type | 3.87 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.79 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.35 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.74 | MC |
| SRR7265401 | coleoptile | 2dA | 1.10 | MC |
| SRR7265402 | coleoptile | 2dA | 1.35 | MC |
| SRR7265403 | coleoptile | 2dN | 2.40 | MC |
| SRR7265404 | coleoptile | 2dN | 1.02 | MC |
| SRR7265405 | coleoptile | 2dN | 1.52 | MC |
| SRR7265406 | coleoptile | 3dA | 3.02 | MC |
| SRR7265408 | coleoptile | 3dA | 1.72 | MC |
| SRR7265409 | coleoptile | 3dN | 1.37 | MC |
| SRR7265410 | coleoptile | 3dN | 1.10 | MC |
| SRR7265412 | coleoptile | 4dA | 2.63 | MC |
| SRR7265414 | coleoptile | 4dA | 1.71 | MC |
| SRR7265416 | coleoptile | 4dN | 1.40 | MC |
| SRR7265417 | coleoptile | 4dN | 1.32 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.77 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 3.03 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.21 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.12 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.46 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.95 | MC |
| SRR7265382 | embryo | 3hA | 3.00 | MC |
| SRR7265383 | embryo | 3hA | 2.08 | MC |
| SRR7265388 | embryo | 12hA | 3.06 | MC |
| SRR7265390 | embryo | 12hA | 1.85 | MC |
| SRR7265391 | embryo | 12hN | 2.96 | MC |
| SRR7265392 | embryo | 12hN | 2.45 | MC |
| SRR7265393 | embryo | 12hN | 3.30 | MC |
| SRR7265394 | embryo | 24hA | 2.17 | MC |
| SRR7265395 | embryo | 24hA | 3.48 | MC |
| SRR7265396 | embryo | 24hA | 3.60 | MC |
| SRR7265397 | embryo | 24hN | 1.93 | MC |
| SRR7265399 | embryo | 24hN | 3.27 | MC |
| SRR2338866 | endosprem | control | 4.36 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.21 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.75 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.56 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.70 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.24 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.50 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.75 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.62 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.00 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.20 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.39 | MC |
| SRR4457248 | flag_leaf | DAH44 | 5.22 | MC |
| SRR1213691 | flower | wt | 1.90 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.64 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.61 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 4.10 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.13 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.30 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.06 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.84 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.16 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.64 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.08 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.12 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.83 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.17 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.68 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.34 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.87 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.93 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.00 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.45 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.23 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.56 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.53 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.54 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.48 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.55 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.61 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.56 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.89 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.40 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 4.46 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.83 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.52 | MC |
| SRR6417967 | leaf | H2O_control | 1.07 | MC |
| SRR6417969 | leaf | H2O_control | 1.06 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.51 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 3.06 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.93 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.61 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.98 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.68 | MC |
| SRR1213692 | leaf | wt | 2.60 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 6.25 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 5.64 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.42 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.56 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 5.13 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.27 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 5.72 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 4.62 | MC |
| SRR6168973 | leaf | none (control) | 2.19 | MC |
| SRR6168974 | leaf | none (control) | 1.20 | MC |
| SRR6168975 | leaf | none (control) | 3.89 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.00 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.72 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.00 | MC |
| SRR6168980 | leaf | none (control) | 0.88 | MC |
| SRR6168981 | leaf | none (control) | 1.18 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.95 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.94 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.42 | MC |
| SRR8582888 | panicle | AM | 1.67 | MC |
| SRR8582889 | panicle | AM | 0.96 | MC |
| SRR8582890 | panicle | AM | 1.32 | MC |
| SRR8582891 | panicle | PM | 5.24 | MC |
| SRR8582892 | panicle | PM | 6.92 | MC |
| SRR5110429 | panicle | Dawn | 2.57 | MC |
| SRR5110446 | panicle | Dusk | 3.94 | MC |
| SRR5110447 | panicle | Dusk | 1.36 | MC |
| SRR5110448 | panicle | Dusk | 4.89 | MC |
| SRR5110457 | panicle | Dawn + 21h | 3.15 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.68 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.05 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.74 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.40 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.65 | MC |
| SRR1213694 | root | wt | 1.04 | MC |
| SRR1213695 | root | wt | 1.52 | MC |
| SRR4947478 | root | control | 2.76 | MC |
| SRR4947479 | root | control | 2.89 | MC |
| SRR4947485 | root | Al | 1.45 | MC |
| SRR4947487 | root | control | 1.63 | MC |
| SRR4947488 | root | control | 2.19 | MC |
| SRR4947501 | root | Al | 4.45 | MC |
| SRR4947502 | root | control | 2.89 | MC |
| SRR4947504 | root | control | 2.79 | MC |
| SRR4947506 | root | Al | 3.24 | MC |
| SRR4947507 | root | Al | 2.86 | MC |
| SRR4947509 | root | Al | 1.48 | MC |
| SRR6441554 | seedling | wild_type | 2.19 | MC |
| SRR2154082 | seedling | wt | 2.20 | MC |
| SRR2154083 | seedling | wt | 1.08 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 4.04 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.29 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.44 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.00 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.54 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.98 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.92 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.25 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.73 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.05 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.07 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.94 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.25 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.10 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.53 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.66 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.09 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.45 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.95 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.33 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.67 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.03 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.98 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.22 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.00 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.34 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.74 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.95 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.72 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.24 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.85 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.10 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.45 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.90 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 7.74 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.66 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.78 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.63 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.85 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 2.90 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.14 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.40 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.18 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 3.75 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.34 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 4.19 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 2.79 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.46 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.71 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 2.26 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.84 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.93 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.35 | MC |