| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.64 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.95 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.53 | MC |
| SRR4947495 | root | control | 2.55 | MC |
| SRR7265400 | coleoptile | 2dA | 0.91 | MC |
| SRR7265401 | coleoptile | 2dA | 1.19 | MC |
| SRR7265402 | coleoptile | 2dA | 0.92 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.65 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.73 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.09 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.35 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.38 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.53 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.45 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.41 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.34 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.73 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.93 | MC |
| SRR8060835 | leaf | wild_type | 0.22 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.52 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.48 | MC |
| SRR1761530 | leaf | control | 0.44 | MC |
| SRR504365 | leaf | wt | 0.22 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.43 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.74 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.45 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.30 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.30 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.43 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.77 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.41 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.67 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.47 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.64 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.32 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.50 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.72 | MC |
| SRR6502100 | leaf | control | 1.12 | MC |
| SRR6502101 | leaf | control | 0.58 | MC |
| SRR6502102 | leaf | control | 0.44 | MC |
| SRR5856927 | leaf | control | 1.45 | MC |
| SRR5856928 | leaf | control | 0.99 | MC |
| SRR5856929 | leaf | control | 0.80 | MC |
| SRR5856930 | leaf | salt | 0.24 | MC |
| SRR5856931 | leaf | salt | 0.36 | MC |
| SRR5856932 | leaf | salt | 1.84 | MC |
| SRR5856933 | leaf | control | 1.12 | MC |
| SRR5856934 | leaf | control | 2.22 | MC |
| SRR5856935 | leaf | control | 1.42 | MC |
| SRR5856936 | leaf | salt | 1.57 | MC |
| SRR5856937 | leaf | salt | 1.18 | MC |
| SRR5856938 | leaf | salt | 1.40 | MC |
| SRR6168973 | leaf | none (control) | 1.06 | MC |
| SRR6168974 | leaf | none (control) | 1.13 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.41 | MC |
| SRR8582890 | panicle | AM | 0.29 | MC |
| SRR5110429 | panicle | Dawn | 1.10 | MC |
| SRR5110430 | panicle | Dawn | 2.05 | MC |
| SRR5110431 | panicle | Dawn | 1.54 | MC |
| SRR5110432 | panicle | Dawn | 2.20 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.16 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.97 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.64 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.73 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.07 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.39 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.71 | MC |
| SRR5110440 | panicle | Dawn + 7h | 2.53 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.58 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.76 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.00 | MC |
| SRR5110446 | panicle | Dusk | 3.77 | MC |
| SRR5110447 | panicle | Dusk | 1.89 | MC |
| SRR5110448 | panicle | Dusk | 3.08 | MC |
| SRR5110449 | panicle | Dawn + 14h | 5.69 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.41 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.59 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.99 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.57 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 2.17 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 2.20 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.01 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.74 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.90 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.32 | MC |
| SRR1633182 | panicle | WT | 0.40 | MC |
| SRR1633185 | panicle | WT | 0.49 | MC |
| SRR5126147 | root | "mock,1_day" | 2.77 | MC |
| SRR5126149 | root | "mock,1_day" | 1.88 | MC |
| SRR5126153 | root | "mock,7_days" | 1.56 | MC |
| SRR5126155 | root | "mock,7_days" | 0.65 | MC |
| SRR5126157 | root | "mock,7_days" | 0.75 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.41 | MC |
| SRR5126165 | root | "mock,14_days" | 1.35 | MC |
| SRR5126167 | root | "mock,14_days" | 0.84 | MC |
| SRR5126169 | root | "mock,14_days" | 1.93 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.11 | MC |
| SRR1213694 | root | wt | 0.63 | MC |
| SRR4947478 | root | control | 1.42 | MC |
| SRR4947479 | root | control | 3.34 | MC |
| SRR4947480 | root | control | 1.28 | MC |
| SRR4947481 | root | control | 0.84 | MC |
| SRR4947482 | root | Al | 2.08 | MC |
| SRR4947483 | root | Al | 1.76 | MC |
| SRR4947487 | root | control | 1.85 | MC |
| SRR4947490 | root | Al | 3.82 | MC |
| SRR4947491 | root | Al | 1.95 | MC |
| SRR4947498 | root | Al | 3.08 | MC |
| SRR4947499 | root | Al | 3.28 | MC |
| SRR4947502 | root | control | 2.14 | MC |
| SRR4947503 | root | control | 4.25 | MC |
| SRR4947504 | root | control | 0.94 | MC |
| SRR4947505 | root | control | 1.44 | MC |
| SRR4947506 | root | Al | 1.41 | MC |
| SRR4947507 | root | Al | 2.44 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.38 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.52 | MC |
| SRR6502094 | root | control | 0.59 | MC |
| SRR6502095 | root | control | 0.47 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.66 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.21 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.48 | MC |
| SRR6502106 | root | control | 0.86 | MC |
| SRR6502107 | root | control | 0.59 | MC |
| SRR6502108 | root | control | 2.02 | MC |
| SRR1740431 | root_elongation_zone | wt | 3.23 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.82 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.58 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.24 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.37 | MC |
| SRR2154086 | seedling | wt | 2.08 | MC |
| SRR2154083 | seedling | wt | 2.55 | MC |
| SRR2154087 | seedling | wt | 1.64 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.18 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.11 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.82 | MC |
| SRR358793 | seedling | wt | 0.61 | MC |
| SRR358794 | seedling | wt | 0.65 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.57 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.96 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.00 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.39 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.29 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.93 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.14 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.10 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.64 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.48 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.67 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.49 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.96 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.54 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.51 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.42 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.83 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.73 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.88 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.42 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.49 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.65 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.64 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.51 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.49 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.27 | MC |