| SRR4457252 | 2nd_leaf | DAH12 | 0.36 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.36 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.28 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.54 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.50 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.81 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.15 | MC |
| SRR5560728 | caryopsis | wild_type | 0.31 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.48 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.87 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.91 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.86 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.14 | MC |
| SRR4457238 | flag_leaf | DAH20 | 2.78 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.68 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.66 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.87 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.36 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.00 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.89 | MC |
| SRR8240824 | leaf | wild_type | 0.36 | MC |
| SRR8240825 | leaf | wild_type | 0.38 | MC |
| SRR8240826 | leaf | wild_type | 0.29 | MC |
| SRR8240819 | leaf | wild_type | 0.52 | MC |
| SRR8240820 | leaf | wild_type | 0.24 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.55 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.50 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.82 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.54 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.38 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.02 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.42 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.89 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.33 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.32 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.60 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.60 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.40 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.53 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.85 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.33 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.52 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.60 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.45 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.49 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.86 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.71 | MC |
| SRR6417967 | leaf | H2O_control | 0.65 | MC |
| SRR6417968 | leaf | H2O_control | 1.75 | MC |
| SRR6417969 | leaf | H2O_control | 0.98 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.58 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.08 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.49 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.54 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 2.15 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.50 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.54 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.82 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.89 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.39 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.40 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.20 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.71 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.39 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.39 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.68 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.34 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.32 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.34 | MC |
| SRR6502090 | leaf | control | 0.56 | MC |
| SRR6168980 | leaf | none (control) | 0.18 | MC |
| SRR6168981 | leaf | none (control) | 0.26 | MC |
| SRR8582888 | panicle | AM | 0.38 | MC |
| SRR8582889 | panicle | AM | 0.48 | MC |
| SRR8582890 | panicle | AM | 0.26 | MC |
| SRR8582893 | panicle | PM | 0.54 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.96 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.44 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.41 | MC |
| SRR5126167 | root | "mock,14_days" | 0.28 | MC |
| SRR6441554 | seedling | wild_type | 0.71 | MC |
| SRR6441555 | seedling | wild_type | 1.26 | MC |
| SRR2154086 | seedling | wt | 0.39 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.01 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.71 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.66 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.88 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.40 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.75 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.55 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.40 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.53 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.97 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.83 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.49 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.33 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.59 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.24 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.80 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.72 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.19 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.83 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.55 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.76 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.16 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.25 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.70 | MC |