| SRR4457252 | 2nd_leaf | DAH12 | 0.76 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.55 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.07 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.37 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.99 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.93 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.14 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.39 | MC |
| SRR7265400 | coleoptile | 2dA | 1.78 | MC |
| SRR7265401 | coleoptile | 2dA | 1.31 | MC |
| SRR7265402 | coleoptile | 2dA | 1.41 | MC |
| SRR7265403 | coleoptile | 2dN | 0.40 | MC |
| SRR7265404 | coleoptile | 2dN | 0.58 | MC |
| SRR7265407 | coleoptile | 3dA | 0.84 | MC |
| SRR7265410 | coleoptile | 3dN | 0.33 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.63 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.27 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.40 | MC |
| SRR7265378 | embryo | 1hA | 0.30 | MC |
| SRR7265392 | embryo | 12hN | 0.55 | MC |
| SRR7265394 | embryo | 24hA | 1.83 | MC |
| SRR7265395 | embryo | 24hA | 0.76 | MC |
| SRR7265396 | embryo | 24hA | 0.84 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.25 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.84 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.60 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.81 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.43 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.65 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.67 | MC |
| SRR4457246 | flag_leaf | DAH44 | 4.25 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.36 | MC |
| SRR8240826 | leaf | wild_type | 0.60 | MC |
| SRR8240818 | leaf | wild_type | 0.49 | MC |
| SRR8240819 | leaf | wild_type | 1.43 | MC |
| SRR8240820 | leaf | wild_type | 1.93 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.75 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.54 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.60 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.94 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.32 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.10 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.19 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.09 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.44 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.50 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.94 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.73 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.58 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.22 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.82 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.34 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.87 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.23 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.86 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.23 | MC |
| SRR1761528 | leaf | drought | 1.86 | MC |
| SRR1761529 | leaf | drought | 2.23 | MC |
| SRR504365 | leaf | wt | 0.51 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.54 | MC |
| SRR6417969 | leaf | H2O_control | 0.52 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.12 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.85 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.71 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.13 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.37 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.41 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.69 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.80 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 2.40 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.06 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.68 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.78 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.25 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.27 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.37 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.60 | MC |
| SRR6502090 | leaf | control | 0.97 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.47 | MC |
| SRR6502100 | leaf | control | 0.57 | MC |
| SRR5856927 | leaf | control | 0.21 | MC |
| SRR5856928 | leaf | control | 0.87 | MC |
| SRR5856929 | leaf | control | 0.32 | MC |
| SRR5856933 | leaf | control | 0.59 | MC |
| SRR5856934 | leaf | control | 1.45 | MC |
| SRR5856935 | leaf | control | 0.98 | MC |
| SRR5856936 | leaf | salt | 1.37 | MC |
| SRR5856937 | leaf | salt | 0.90 | MC |
| SRR5856938 | leaf | salt | 0.64 | MC |
| SRR6168979 | leaf | none (control) | 1.43 | MC |
| SRR6168980 | leaf | none (control) | 0.84 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.44 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.97 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.79 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.37 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.51 | MC |
| SRR5126147 | root | "mock,1_day" | 1.45 | MC |
| SRR5126169 | root | "mock,14_days" | 1.54 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.88 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.55 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.77 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.56 | MC |
| SRR6502093 | root | 100 mM NaCl | 2.40 | MC |
| SRR6502096 | root | control | 0.61 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.99 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.94 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.01 | MC |
| SRR6502106 | root | control | 1.30 | MC |
| SRR6502107 | root | control | 1.05 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.97 | MC |
| SRR6441554 | seedling | wild_type | 0.36 | MC |
| SRR2154086 | seedling | wt | 0.86 | MC |
| SRR2154085 | seedling | wt | 0.44 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.59 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.04 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.02 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.58 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.16 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.63 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.21 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.54 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.45 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.46 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.46 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.59 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.35 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.48 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.42 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.46 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.71 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.60 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.99 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.01 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.47 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.41 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.36 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.85 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.33 | MC |