| SRR4457251 | 2nd_leaf | DAH4 | 0.54 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.28 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.50 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.77 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.46 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.65 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.61 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.63 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.44 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.55 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.87 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.09 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.31 | MC |
| SRR5560728 | caryopsis | wild_type | 0.29 | MC |
| SRR7265401 | coleoptile | 2dA | 0.79 | MC |
| SRR7265403 | coleoptile | 2dN | 0.55 | MC |
| SRR7265406 | coleoptile | 3dA | 0.35 | MC |
| SRR7265407 | coleoptile | 3dA | 0.32 | MC |
| SRR7265410 | coleoptile | 3dN | 0.61 | MC |
| SRR7265411 | coleoptile | 3dN | 0.31 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.70 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.95 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.37 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.04 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.31 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.27 | MC |
| SRR7265376 | embryo | 1hA | 1.36 | MC |
| SRR7265377 | embryo | 1hA | 0.59 | MC |
| SRR7265378 | embryo | 1hA | 0.63 | MC |
| SRR7265379 | embryo | 1hN | 1.92 | MC |
| SRR7265380 | embryo | 1hN | 0.48 | MC |
| SRR7265381 | embryo | 1hN | 1.28 | MC |
| SRR7265382 | embryo | 3hA | 1.11 | MC |
| SRR7265383 | embryo | 3hA | 1.25 | MC |
| SRR7265384 | embryo | 3hA | 1.39 | MC |
| SRR7265385 | embryo | 3hN | 1.20 | MC |
| SRR7265386 | embryo | 3hN | 0.96 | MC |
| SRR7265387 | embryo | 3hN | 0.74 | MC |
| SRR7265388 | embryo | 12hA | 0.71 | MC |
| SRR7265389 | embryo | 12hA | 0.93 | MC |
| SRR7265390 | embryo | 12hA | 1.26 | MC |
| SRR7265391 | embryo | 12hN | 1.37 | MC |
| SRR7265392 | embryo | 12hN | 0.53 | MC |
| SRR7265396 | embryo | 24hA | 0.73 | MC |
| SRR7265398 | embryo | 24hN | 0.76 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.30 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.21 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.67 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.62 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.39 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.81 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.30 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.50 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.39 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.38 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.75 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.52 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.30 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.57 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.02 | MC |
| SRR8060835 | leaf | wild_type | 0.46 | MC |
| SRR8240820 | leaf | wild_type | 0.53 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.63 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.84 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.72 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.56 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.24 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.00 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.29 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.68 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.46 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.53 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.78 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.17 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.30 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.17 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.30 | MC |
| SRR1761529 | leaf | drought | 1.17 | MC |
| SRR1761530 | leaf | control | 2.30 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.44 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.60 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.54 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.58 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.76 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.58 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.55 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.40 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.39 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.47 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.42 | MC |
| SRR1213692 | leaf | wt | 0.90 | MC |
| SRR1213693 | leaf | wt | 0.45 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.29 | MC |
| SRR6168979 | leaf | none (control) | 0.41 | MC |
| SRR6168980 | leaf | none (control) | 0.42 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.19 | MC |
| SRR8582888 | panicle | AM | 0.28 | MC |
| SRR8582889 | panicle | AM | 0.11 | MC |
| SRR8582890 | panicle | AM | 0.39 | MC |
| SRR8582893 | panicle | PM | 0.22 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.63 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.71 | MC |
| SRR5126148 | root | "mock,1_day" | 0.34 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.38 | MC |
| SRR1213694 | root | wt | 0.41 | MC |
| SRR1213695 | root | wt | 0.68 | MC |
| SRR4947480 | root | control | 0.73 | MC |
| SRR4947498 | root | Al | 0.90 | MC |
| SRR4947499 | root | Al | 0.55 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.39 | MC |
| SRR2154082 | seedling | wt | 0.50 | MC |
| SRR2154083 | seedling | wt | 0.73 | MC |
| SRR2154085 | seedling | wt | 0.71 | MC |
| SRR2154087 | seedling | wt | 0.54 | MC |
| SRR3098742 | seedling | wt | 0.27 | MC |
| SRR3098743 | seedling | wt | 0.21 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.09 | MC |
| SRR358793 | seedling | wt | 1.78 | MC |
| SRR358794 | seedling | wt | 0.81 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.82 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.77 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.25 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.06 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.87 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.32 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.30 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.44 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.84 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.43 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.46 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.50 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.58 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.57 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.37 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.93 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.48 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.71 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.65 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.48 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.05 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.45 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.48 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.12 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.73 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.64 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.50 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.09 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.46 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.39 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.37 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.49 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.52 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.84 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.34 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.30 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.18 | MC |