| SRR4457249 | 2nd_leaf | DAH4 | 1.80 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.14 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.74 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.34 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.29 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.25 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 3.60 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.98 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.03 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.16 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.75 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.44 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.40 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 5.36 | MC |
| SRR5560727 | caryopsis | wild_type | 1.14 | MC |
| SRR5560728 | caryopsis | wild_type | 1.36 | MC |
| SRR5560729 | caryopsis | wild_type | 1.02 | MC |
| SRR2338867 | endosprem | control | 0.44 | MC |
| SRR2338868 | endosprem | high_temperature | 0.49 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.35 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.25 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.41 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.25 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.94 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.16 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.15 | MC |
| SRR4457238 | flag_leaf | DAH20 | 2.79 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.49 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.65 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.66 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.86 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.91 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.91 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.38 | MC |
| SRR4457248 | flag_leaf | DAH44 | 6.12 | MC |
| SRR8060835 | leaf | wild_type | 0.22 | MC |
| SRR8060836 | leaf | wild_type | 0.60 | MC |
| SRR8060837 | leaf | wild_type | 0.29 | MC |
| SRR8240818 | leaf | wild_type | 1.09 | MC |
| SRR8240819 | leaf | wild_type | 0.93 | MC |
| SRR8240820 | leaf | wild_type | 0.83 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.90 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.67 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.01 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.74 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.93 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.92 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.15 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.03 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.02 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.03 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.96 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.31 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.38 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.11 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.01 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.26 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.76 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.68 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.34 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.21 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.92 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.76 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.82 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.04 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.14 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.16 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.66 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.60 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.10 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.03 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.52 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.35 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.40 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.92 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.24 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.03 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.24 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.03 | MC |
| SRR1761530 | leaf | control | 1.24 | MC |
| SRR1761531 | leaf | control | 1.03 | MC |
| SRR504365 | leaf | wt | 2.31 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.37 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.85 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.57 | MC |
| SRR6417967 | leaf | H2O_control | 1.39 | MC |
| SRR6417968 | leaf | H2O_control | 1.36 | MC |
| SRR6417969 | leaf | H2O_control | 1.67 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.79 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 3.83 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.65 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.74 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.28 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.24 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.28 | MC |
| SRR1213693 | leaf | wt | 0.22 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.53 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.22 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.52 | MC |
| SRR6502088 | leaf | control | 1.05 | MC |
| SRR6502089 | leaf | control | 0.94 | MC |
| SRR6502090 | leaf | control | 1.10 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.17 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.48 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.21 | MC |
| SRR6502100 | leaf | control | 0.61 | MC |
| SRR6502101 | leaf | control | 0.63 | MC |
| SRR6502102 | leaf | control | 1.33 | MC |
| SRR5856929 | leaf | control | 0.19 | MC |
| SRR5856930 | leaf | salt | 0.18 | MC |
| SRR5856932 | leaf | salt | 0.18 | MC |
| SRR5856933 | leaf | control | 0.29 | MC |
| SRR5856935 | leaf | control | 0.64 | MC |
| SRR5856936 | leaf | salt | 0.46 | MC |
| SRR5856937 | leaf | salt | 0.36 | MC |
| SRR5856938 | leaf | salt | 0.48 | MC |
| SRR8582891 | panicle | PM | 2.13 | MC |
| SRR8582893 | panicle | PM | 2.25 | MC |
| SRR5110429 | panicle | Dawn | 1.50 | MC |
| SRR5110430 | panicle | Dawn | 2.85 | MC |
| SRR5110431 | panicle | Dawn | 0.94 | MC |
| SRR5110432 | panicle | Dawn | 1.12 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.25 | MC |
| SRR5110445 | panicle | Dusk | 0.54 | MC |
| SRR5110446 | panicle | Dusk | 0.51 | MC |
| SRR5110448 | panicle | Dusk | 2.27 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.23 | MC |
| SRR5110452 | panicle | Dawn + 14h | 2.15 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.13 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.70 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.60 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.28 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.96 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.16 | MC |
| SRR1213695 | root | wt | 0.19 | MC |
| SRR6441554 | seedling | wild_type | 1.04 | MC |
| SRR6441555 | seedling | wild_type | 1.97 | MC |
| SRR2154086 | seedling | wt | 2.06 | MC |
| SRR2154082 | seedling | wt | 2.44 | MC |
| SRR2154083 | seedling | wt | 2.30 | MC |
| SRR2154084 | seedling | wt | 0.89 | MC |
| SRR2154085 | seedling | wt | 1.92 | MC |
| SRR2154087 | seedling | wt | 3.90 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.69 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.91 | MC |
| SRR1944583 | seedling | no_treatment | 4.02 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.52 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 5.74 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.83 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.11 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.22 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.78 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.87 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.33 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.11 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.12 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.03 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.48 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.57 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.24 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.97 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.17 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.69 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.21 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.74 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.48 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.11 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.00 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.49 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.03 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.98 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.43 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.25 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.66 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.68 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.25 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.51 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.58 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.67 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.35 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.34 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.38 | MC |