| SRR4457249 | 2nd_leaf | DAH4 | 3.29 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.64 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.75 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.39 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.52 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.45 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.76 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.25 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.88 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.98 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.47 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.79 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.93 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.40 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.90 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.16 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.58 | MC |
| SRR3745125 | anther | wt | 1.07 | MC |
| SRR3745126 | anther | wt | 1.42 | MC |
| SRR3745127 | anther | wt | 1.10 | MC |
| SRR358798 | callus | wt | 1.86 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.42 | MC |
| SRR7265383 | embryo | 3hA | 0.43 | MC |
| SRR2338866 | endosprem | control | 1.33 | MC |
| SRR2338867 | endosprem | control | 1.62 | MC |
| SRR2338869 | endosprem | high_temperature | 2.75 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.67 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.46 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.70 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.56 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.35 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.57 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.64 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.12 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.93 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.30 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.18 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.87 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.59 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.37 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.61 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.59 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.30 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.33 | MC |
| SRR1213691 | flower | wt | 1.27 | MC |
| SRR8060835 | leaf | wild_type | 0.84 | MC |
| SRR8060836 | leaf | wild_type | 0.72 | MC |
| SRR8060837 | leaf | wild_type | 0.37 | MC |
| SRR8240825 | leaf | wild_type | 0.29 | MC |
| SRR8240826 | leaf | wild_type | 0.70 | MC |
| SRR8240819 | leaf | wild_type | 0.32 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.24 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.38 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.20 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.39 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.28 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.53 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.47 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.43 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.48 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 3.86 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.45 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 3.86 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.45 | MC |
| SRR1761528 | leaf | drought | 3.86 | MC |
| SRR1761529 | leaf | drought | 2.45 | MC |
| SRR504365 | leaf | wt | 1.15 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.42 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.34 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.41 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.22 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.56 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.51 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.21 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.41 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.34 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.47 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.51 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.84 | MC |
| SRR1213692 | leaf | wt | 0.81 | MC |
| SRR1213693 | leaf | wt | 2.23 | MC |
| SRR5856938 | leaf | salt | 0.18 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 3.27 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.90 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.43 | MC |
| SRR6168973 | leaf | none (control) | 0.54 | MC |
| SRR6168974 | leaf | none (control) | 0.76 | MC |
| SRR6168975 | leaf | none (control) | 1.33 | MC |
| SRR6168979 | leaf | none (control) | 0.34 | MC |
| SRR6168981 | leaf | none (control) | 0.49 | MC |
| SRR8582890 | panicle | AM | 0.28 | MC |
| SRR8582892 | panicle | PM | 0.93 | MC |
| SRR5110431 | panicle | Dawn | 0.79 | MC |
| SRR5110432 | panicle | Dawn | 0.46 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.03 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.36 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.80 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.96 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.47 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.92 | MC |
| SRR5110445 | panicle | Dusk | 1.21 | MC |
| SRR5110447 | panicle | Dusk | 2.02 | MC |
| SRR5110448 | panicle | Dusk | 1.04 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.50 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.72 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.58 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.40 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.68 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.78 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.28 | MC |
| SRR1633182 | panicle | WT | 0.70 | MC |
| SRR1633185 | panicle | WT | 3.56 | MC |
| SRR1213695 | root | wt | 1.34 | MC |
| SRR6441554 | seedling | wild_type | 0.24 | MC |
| SRR6441555 | seedling | wild_type | 0.35 | MC |
| SRR2154082 | seedling | wt | 0.30 | MC |
| SRR2154084 | seedling | wt | 0.33 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.57 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.56 | MC |
| SRR358792 | seedling | wt | 1.28 | MC |
| SRR358793 | seedling | wt | 2.05 | MC |
| SRR358794 | seedling | wt | 1.59 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.63 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 13.01 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.78 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.40 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.82 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.44 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.25 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.41 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.34 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.26 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.59 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.25 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.48 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.94 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.25 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.83 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.99 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.01 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.77 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.41 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.31 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.74 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.43 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.59 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.20 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.13 | MC |