| SRR5560728 | caryopsis | wild_type | 0.28 | MC |
| SRR7265384 | embryo | 3hA | 0.38 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.59 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.68 | MC |
| SRR8060836 | leaf | wild_type | 0.29 | MC |
| SRR8060837 | leaf | wild_type | 0.25 | MC |
| SRR8240819 | leaf | wild_type | 0.45 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.37 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.18 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.58 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.18 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.37 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.24 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.83 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.84 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.24 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 1.76 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.38 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.74 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.92 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.59 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.52 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.75 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.06 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.60 | MC |
| SRR1761528 | leaf | drought | 0.50 | MC |
| SRR1761529 | leaf | drought | 0.61 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.43 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.26 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.63 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.60 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.45 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.31 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.32 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.85 | MC |
| SRR6168980 | leaf | none (control) | 0.18 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.27 | MC |
| SRR8582888 | panicle | AM | 1.83 | MC |
| SRR8582893 | panicle | PM | 0.62 | MC |
| SRR1213695 | root | wt | 0.32 | MC |
| SRR2154085 | seedling | wt | 0.42 | MC |
| SRR3098741 | seedling | wt | 0.25 | MC |
| SRR3098742 | seedling | wt | 0.23 | MC |
| SRR3098743 | seedling | wt | 0.28 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.18 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.05 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.53 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.48 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.79 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.16 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.60 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.82 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.71 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.32 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.23 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.52 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.89 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.41 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.45 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.30 | MC |