| SRR5560727 | caryopsis | wild_type | 0.34 | MC |
| SRR5560729 | caryopsis | wild_type | 0.41 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.56 | MC |
| SRR7265400 | coleoptile | 2dA | 1.07 | MC |
| SRR7265401 | coleoptile | 2dA | 0.83 | MC |
| SRR7265402 | coleoptile | 2dA | 1.00 | MC |
| SRR7265403 | coleoptile | 2dN | 1.95 | MC |
| SRR7265404 | coleoptile | 2dN | 2.24 | MC |
| SRR7265405 | coleoptile | 2dN | 1.77 | MC |
| SRR7265406 | coleoptile | 3dA | 1.06 | MC |
| SRR7265409 | coleoptile | 3dN | 1.17 | MC |
| SRR7265410 | coleoptile | 3dN | 2.29 | MC |
| SRR7265411 | coleoptile | 3dN | 2.12 | MC |
| SRR7265412 | coleoptile | 4dA | 0.95 | MC |
| SRR7265413 | coleoptile | 4dA | 1.47 | MC |
| SRR7265416 | coleoptile | 4dN | 1.34 | MC |
| SRR7265417 | coleoptile | 4dN | 1.24 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.86 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.08 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.64 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.54 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.34 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.45 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.91 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.54 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.90 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.67 | MC |
| SRR7265377 | embryo | 1hA | 0.43 | MC |
| SRR7265378 | embryo | 1hA | 0.50 | MC |
| SRR7265379 | embryo | 1hN | 0.50 | MC |
| SRR7265380 | embryo | 1hN | 0.74 | MC |
| SRR7265381 | embryo | 1hN | 0.42 | MC |
| SRR7265383 | embryo | 3hA | 0.61 | MC |
| SRR7265384 | embryo | 3hA | 0.90 | MC |
| SRR7265385 | embryo | 3hN | 1.16 | MC |
| SRR7265386 | embryo | 3hN | 0.62 | MC |
| SRR7265387 | embryo | 3hN | 1.00 | MC |
| SRR7265388 | embryo | 12hA | 2.09 | MC |
| SRR7265389 | embryo | 12hA | 1.65 | MC |
| SRR7265390 | embryo | 12hA | 2.69 | MC |
| SRR7265391 | embryo | 12hN | 2.24 | MC |
| SRR7265392 | embryo | 12hN | 2.13 | MC |
| SRR7265393 | embryo | 12hN | 2.89 | MC |
| SRR7265394 | embryo | 24hA | 2.30 | MC |
| SRR7265395 | embryo | 24hA | 2.77 | MC |
| SRR7265396 | embryo | 24hA | 2.76 | MC |
| SRR7265397 | embryo | 24hN | 4.17 | MC |
| SRR7265398 | embryo | 24hN | 3.57 | MC |
| SRR7265399 | embryo | 24hN | 2.71 | MC |
| SRR2338869 | endosprem | high_temperature | 1.57 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.77 | MC |
| SRR1213691 | flower | wt | 0.37 | MC |
| SRR8240826 | leaf | wild_type | 0.34 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.41 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.25 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.96 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.59 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.42 | MC |
| SRR504365 | leaf | wt | 0.40 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.40 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.23 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.51 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.33 | MC |
| SRR1213693 | leaf | wt | 0.33 | MC |
| SRR5856933 | leaf | control | 0.39 | MC |
| SRR5856934 | leaf | control | 0.55 | MC |
| SRR5856935 | leaf | control | 0.43 | MC |
| SRR5856936 | leaf | salt | 0.18 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 4.83 | MC |
| SRR6168973 | leaf | none (control) | 0.25 | MC |
| SRR6168975 | leaf | none (control) | 0.60 | MC |
| SRR8582888 | panicle | AM | 1.31 | MC |
| SRR8582889 | panicle | AM | 0.35 | MC |
| SRR8582890 | panicle | AM | 0.25 | MC |
| SRR8582891 | panicle | PM | 1.35 | MC |
| SRR8582893 | panicle | PM | 0.75 | MC |
| SRR5110445 | panicle | Dusk | 0.67 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.77 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.34 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.15 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.17 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.43 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.60 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.78 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.67 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.38 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.92 | MC |
| SRR5126147 | root | "mock,1_day" | 0.46 | MC |
| SRR5126148 | root | "mock,1_day" | 0.38 | MC |
| SRR5126153 | root | "mock,7_days" | 0.51 | MC |
| SRR5126155 | root | "mock,7_days" | 0.33 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.59 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.36 | MC |
| SRR5126165 | root | "mock,14_days" | 0.69 | MC |
| SRR1213695 | root | wt | 0.21 | MC |
| SRR4947479 | root | control | 2.59 | MC |
| SRR4947482 | root | Al | 0.63 | MC |
| SRR4947483 | root | Al | 2.59 | MC |
| SRR4947487 | root | control | 2.52 | MC |
| SRR4947490 | root | Al | 1.26 | MC |
| SRR4947491 | root | Al | 2.60 | MC |
| SRR4947498 | root | Al | 0.53 | MC |
| SRR4947499 | root | Al | 2.52 | MC |
| SRR4947503 | root | control | 2.15 | MC |
| SRR4947506 | root | Al | 1.04 | MC |
| SRR4947507 | root | Al | 2.15 | MC |
| SRR6502107 | root | control | 0.59 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.27 | MC |
| SRR2154086 | seedling | wt | 0.79 | MC |
| SRR2154082 | seedling | wt | 0.44 | MC |
| SRR2154084 | seedling | wt | 0.59 | MC |
| SRR2154085 | seedling | wt | 0.86 | MC |
| SRR2154087 | seedling | wt | 0.85 | MC |
| SRR3098741 | seedling | wt | 0.17 | MC |
| SRR3098743 | seedling | wt | 0.19 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.62 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.35 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.25 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.89 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.47 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.50 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.37 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.65 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.41 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.43 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.49 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.02 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.42 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.18 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.53 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.50 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.39 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.10 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.15 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.64 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 0.75 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.36 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.96 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.02 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.65 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 2.16 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.23 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 3.98 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.39 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.76 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.94 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.92 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.25 | MC |