| SRR358795 | callus | wt | 8.78 | MC |
| SRR358796 | callus | wt | 7.68 | MC |
| SRR358797 | callus | wt | 7.18 | MC |
| SRR358798 | callus | wt | 7.86 | MC |
| SRR7265403 | coleoptile | 2dN | 2.24 | MC |
| SRR7265404 | coleoptile | 2dN | 1.78 | MC |
| SRR7265405 | coleoptile | 2dN | 2.28 | MC |
| SRR7265406 | coleoptile | 3dA | 0.59 | MC |
| SRR7265407 | coleoptile | 3dA | 0.52 | MC |
| SRR7265408 | coleoptile | 3dA | 0.50 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.55 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.49 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.11 | MC |
| SRR7265394 | embryo | 24hA | 0.72 | MC |
| SRR7265395 | embryo | 24hA | 0.60 | MC |
| SRR7265396 | embryo | 24hA | 0.77 | MC |
| SRR7265397 | embryo | 24hN | 0.62 | MC |
| SRR7265398 | embryo | 24hN | 0.53 | MC |
| SRR7265399 | embryo | 24hN | 0.81 | MC |
| SRR8060835 | leaf | wild_type | 0.57 | MC |
| SRR8060836 | leaf | wild_type | 0.84 | MC |
| SRR8060837 | leaf | wild_type | 0.41 | MC |
| SRR8240824 | leaf | wild_type | 1.10 | MC |
| SRR8240825 | leaf | wild_type | 1.65 | MC |
| SRR8240826 | leaf | wild_type | 0.22 | MC |
| SRR8240819 | leaf | wild_type | 0.87 | MC |
| SRR8240820 | leaf | wild_type | 0.28 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.40 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.67 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.59 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.42 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.89 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.92 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.08 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.17 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.23 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.81 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.61 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.62 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 5.16 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.09 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.00 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.54 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.03 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.28 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.46 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.95 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.26 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.14 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.49 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.14 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.49 | MC |
| SRR1761528 | leaf | drought | 1.14 | MC |
| SRR1761531 | leaf | control | 0.49 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.41 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.49 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.20 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.12 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.41 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.98 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.99 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.82 | MC |
| SRR1213692 | leaf | wt | 0.37 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.68 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.03 | MC |
| SRR6502088 | leaf | control | 0.55 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.93 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.74 | MC |
| SRR6502100 | leaf | control | 0.71 | MC |
| SRR6502102 | leaf | control | 0.85 | MC |
| SRR6168973 | leaf | none (control) | 1.28 | MC |
| SRR6168974 | leaf | none (control) | 0.61 | MC |
| SRR6168975 | leaf | none (control) | 2.41 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.62 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.13 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.54 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.93 | MC |
| SRR8582888 | panicle | AM | 0.42 | MC |
| SRR8582889 | panicle | AM | 0.11 | MC |
| SRR8582890 | panicle | AM | 0.67 | MC |
| SRR8582891 | panicle | PM | 1.13 | MC |
| SRR8582892 | panicle | PM | 1.19 | MC |
| SRR8582893 | panicle | PM | 1.30 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.15 | MC |
| SRR5126148 | root | "mock,1_day" | 3.43 | MC |
| SRR4947484 | root | Al | 2.71 | MC |
| SRR4947488 | root | control | 4.58 | MC |
| SRR4947491 | root | Al | 4.23 | MC |
| SRR4947492 | root | Al | 2.84 | MC |
| SRR4947493 | root | Al | 4.58 | MC |
| SRR4947497 | root | control | 4.77 | MC |
| SRR4947498 | root | Al | 4.22 | MC |
| SRR4947499 | root | Al | 4.66 | MC |
| SRR4947500 | root | Al | 1.26 | MC |
| SRR4947501 | root | Al | 1.44 | MC |
| SRR4947505 | root | control | 3.61 | MC |
| SRR4947507 | root | Al | 2.14 | MC |
| SRR4947508 | root | Al | 3.58 | MC |
| SRR6502095 | root | control | 4.34 | MC |
| SRR6441554 | seedling | wild_type | 2.68 | MC |
| SRR6441555 | seedling | wild_type | 1.51 | MC |
| SRR2154085 | seedling | wt | 3.49 | MC |
| SRR2154087 | seedling | wt | 3.60 | MC |
| SRR3098742 | seedling | wt | 2.80 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.23 | MC |
| SRR358791 | seedling | wt | 2.89 | MC |
| SRR358792 | seedling | wt | 2.53 | MC |
| SRR358793 | seedling | wt | 0.87 | MC |
| SRR358794 | seedling | wt | 0.64 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.56 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.41 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.79 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.02 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.87 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.09 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.51 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.56 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.52 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.48 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.62 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.43 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.52 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.44 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.38 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.60 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.36 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.74 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.36 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.39 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.29 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.43 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.58 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 0.88 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.43 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 7.97 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 2.29 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.18 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.82 | MC |