| SRR4457256 | 2nd_leaf | DAH20 | 0.41 | MC |
| SRR6320498 | carpel | wt | 1.80 | MC |
| SRR7265379 | embryo | 1hN | 0.28 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.21 | MC |
| SRR8060835 | leaf | wild_type | 1.44 | MC |
| SRR8060836 | leaf | wild_type | 0.80 | MC |
| SRR8060837 | leaf | wild_type | 0.22 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.88 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.67 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.66 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.16 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.56 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.50 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.42 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.61 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.52 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.96 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.41 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.39 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.26 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.44 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.68 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.27 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.35 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.55 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.88 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.65 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.16 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.43 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.62 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.22 | MC |
| SRR1761530 | leaf | control | 1.04 | MC |
| SRR1761531 | leaf | control | 1.21 | MC |
| SRR504365 | leaf | wt | 1.30 | MC |
| SRR6417967 | leaf | H2O_control | 0.44 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 3.07 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.58 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.92 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.18 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.23 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.97 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.60 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.75 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.38 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.42 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.62 | MC |
| SRR1213692 | leaf | wt | 0.73 | MC |
| SRR1213693 | leaf | wt | 0.32 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.80 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.11 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.49 | MC |
| SRR6502088 | leaf | control | 1.23 | MC |
| SRR6502089 | leaf | control | 0.71 | MC |
| SRR6502090 | leaf | control | 0.62 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.76 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.53 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.63 | MC |
| SRR6502100 | leaf | control | 1.33 | MC |
| SRR6502101 | leaf | control | 0.65 | MC |
| SRR6502102 | leaf | control | 2.52 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.34 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.22 | MC |
| SRR5110430 | panicle | Dawn | 0.75 | MC |
| SRR5110446 | panicle | Dusk | 0.77 | MC |
| SRR1633182 | panicle | WT | 1.97 | MC |
| SRR1633185 | panicle | WT | 3.19 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.39 | MC |
| SRR1213695 | root | wt | 0.42 | MC |
| SRR4947490 | root | Al | 0.54 | MC |
| SRR6502107 | root | control | 0.55 | MC |
| SRR1944583 | seedling | no_treatment | 1.12 | MC |
| SRR358791 | seedling | wt | 1.17 | MC |
| SRR358792 | seedling | wt | 0.88 | MC |
| SRR358793 | seedling | wt | 0.50 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.45 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.47 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.76 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.46 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.32 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.67 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.27 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.43 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.71 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.73 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.49 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.49 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.56 | MC |