| SRR4457249 | 2nd_leaf | DAH4 | 0.79 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.08 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.87 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.23 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 3.13 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.34 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.80 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.19 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 3.13 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 3.12 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.73 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.44 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.36 | MC |
| SRR5560727 | caryopsis | wild_type | 3.25 | MC |
| SRR5560728 | caryopsis | wild_type | 2.94 | MC |
| SRR5560729 | caryopsis | wild_type | 3.08 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.41 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.85 | MC |
| SRR4947495 | root | control | 4.01 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.46 | MC |
| SRR7265401 | coleoptile | 2dA | 2.67 | MC |
| SRR7265402 | coleoptile | 2dA | 3.28 | MC |
| SRR7265403 | coleoptile | 2dN | 1.86 | MC |
| SRR7265404 | coleoptile | 2dN | 1.26 | MC |
| SRR7265405 | coleoptile | 2dN | 1.75 | MC |
| SRR7265406 | coleoptile | 3dA | 3.15 | MC |
| SRR7265408 | coleoptile | 3dA | 2.48 | MC |
| SRR7265409 | coleoptile | 3dN | 2.11 | MC |
| SRR7265410 | coleoptile | 3dN | 0.79 | MC |
| SRR7265411 | coleoptile | 3dN | 0.97 | MC |
| SRR7265412 | coleoptile | 4dA | 1.23 | MC |
| SRR7265413 | coleoptile | 4dA | 3.40 | MC |
| SRR7265414 | coleoptile | 4dA | 3.38 | MC |
| SRR7265415 | coleoptile | 4dN | 2.49 | MC |
| SRR7265416 | coleoptile | 4dN | 3.03 | MC |
| SRR7265417 | coleoptile | 4dN | 1.87 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.93 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.96 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.40 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.27 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.57 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.72 | MC |
| SRR7265376 | embryo | 1hA | 2.25 | MC |
| SRR7265378 | embryo | 1hA | 2.79 | MC |
| SRR7265379 | embryo | 1hN | 2.78 | MC |
| SRR7265380 | embryo | 1hN | 2.72 | MC |
| SRR7265381 | embryo | 1hN | 2.81 | MC |
| SRR7265382 | embryo | 3hA | 2.99 | MC |
| SRR7265383 | embryo | 3hA | 2.83 | MC |
| SRR7265384 | embryo | 3hA | 1.92 | MC |
| SRR7265385 | embryo | 3hN | 3.67 | MC |
| SRR7265386 | embryo | 3hN | 1.49 | MC |
| SRR7265387 | embryo | 3hN | 1.54 | MC |
| SRR7265391 | embryo | 12hN | 2.92 | MC |
| SRR7265392 | embryo | 12hN | 0.52 | MC |
| SRR7265393 | embryo | 12hN | 1.90 | MC |
| SRR7265394 | embryo | 24hA | 2.83 | MC |
| SRR7265395 | embryo | 24hA | 3.59 | MC |
| SRR7265396 | embryo | 24hA | 2.66 | MC |
| SRR7265398 | embryo | 24hN | 1.26 | MC |
| SRR7265399 | embryo | 24hN | 1.58 | MC |
| SRR2338868 | endosprem | high_temperature | 1.86 | MC |
| SRR2338869 | endosprem | high_temperature | 1.11 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.75 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.12 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.00 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.42 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.93 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.77 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.69 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.08 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.97 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.89 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.58 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.67 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.77 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.27 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.16 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.39 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.26 | MC |
| SRR8060836 | leaf | wild_type | 1.37 | MC |
| SRR8060837 | leaf | wild_type | 0.70 | MC |
| SRR8240824 | leaf | wild_type | 0.31 | MC |
| SRR8240825 | leaf | wild_type | 0.30 | MC |
| SRR8240820 | leaf | wild_type | 0.62 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.89 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.91 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.42 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.72 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.86 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.24 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.54 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.58 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.18 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.32 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.94 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.48 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.49 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.45 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.53 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.61 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.54 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.53 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.28 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.01 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.48 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.13 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.73 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.80 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.80 | MC |
| SRR1761531 | leaf | control | 0.80 | MC |
| SRR504365 | leaf | wt | 2.61 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.63 | MC |
| SRR6417968 | leaf | H2O_control | 1.44 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.61 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 3.88 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.28 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 2.22 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.62 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.38 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.44 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.45 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.91 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.61 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.02 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.32 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.51 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.73 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.47 | MC |
| SRR1213692 | leaf | wt | 2.28 | MC |
| SRR1213693 | leaf | wt | 1.74 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.82 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.66 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 6.01 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.78 | MC |
| SRR6168979 | leaf | none (control) | 0.71 | MC |
| SRR6168980 | leaf | none (control) | 1.54 | MC |
| SRR8582888 | panicle | AM | 0.32 | MC |
| SRR8582889 | panicle | AM | 0.40 | MC |
| SRR8582890 | panicle | AM | 0.49 | MC |
| SRR8582891 | panicle | PM | 0.74 | MC |
| SRR5110429 | panicle | Dawn | 3.61 | MC |
| SRR5110430 | panicle | Dawn | 3.07 | MC |
| SRR5110431 | panicle | Dawn | 3.24 | MC |
| SRR5110432 | panicle | Dawn | 1.19 | MC |
| SRR4947496 | root | control | 2.88 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.18 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.39 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.80 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 2.14 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.10 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.64 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.70 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.43 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.41 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.22 | MC |
| SRR5110445 | panicle | Dusk | 3.00 | MC |
| SRR5110446 | panicle | Dusk | 1.99 | MC |
| SRR5110447 | panicle | Dusk | 2.04 | MC |
| SRR5110448 | panicle | Dusk | 2.94 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.98 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.82 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.19 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.64 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.03 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 2.77 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.73 | MC |
| SRR5110457 | panicle | Dawn + 21h | 2.43 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.88 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.10 | MC |
| SRR5110460 | panicle | Dawn + 21h | 3.62 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.83 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.91 | MC |
| SRR1633182 | panicle | WT | 1.02 | MC |
| SRR1633185 | panicle | WT | 2.03 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 4.62 | MC |
| SRR5126148 | root | "mock,1_day" | 3.77 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.30 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 4.91 | MC |
| SRR5126167 | root | "mock,14_days" | 2.28 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.41 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 4.49 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.20 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.40 | MC |
| SRR1213695 | root | wt | 1.45 | MC |
| SRR4947480 | root | control | 4.78 | MC |
| SRR4947481 | root | control | 3.14 | MC |
| SRR4947484 | root | Al | 0.74 | MC |
| SRR4947485 | root | Al | 3.89 | MC |
| SRR4947487 | root | control | 2.87 | MC |
| SRR4947488 | root | control | 3.29 | MC |
| SRR4947489 | root | control | 1.65 | MC |
| SRR4947490 | root | Al | 3.94 | MC |
| SRR4947491 | root | Al | 3.80 | MC |
| SRR4947492 | root | Al | 2.75 | MC |
| SRR4947493 | root | Al | 2.17 | MC |
| SRR4947498 | root | Al | 2.59 | MC |
| SRR4947499 | root | Al | 3.50 | MC |
| SRR4947500 | root | Al | 1.69 | MC |
| SRR4947501 | root | Al | 1.30 | MC |
| SRR4947502 | root | control | 2.51 | MC |
| SRR4947503 | root | control | 3.16 | MC |
| SRR4947504 | root | control | 2.96 | MC |
| SRR4947505 | root | control | 4.20 | MC |
| SRR4947506 | root | Al | 3.81 | MC |
| SRR4947507 | root | Al | 2.73 | MC |
| SRR4947508 | root | Al | 2.79 | MC |
| SRR4947509 | root | Al | 2.88 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.45 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.67 | MC |
| SRR6502093 | root | 100 mM NaCl | 2.61 | MC |
| SRR6502094 | root | control | 1.31 | MC |
| SRR6502095 | root | control | 1.79 | MC |
| SRR6502096 | root | control | 1.74 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.55 | MC |
| SRR6502104 | root | 100 mM NaCl | 2.36 | MC |
| SRR6502105 | root | 100 mM NaCl | 2.03 | MC |
| SRR6502106 | root | control | 1.46 | MC |
| SRR6502107 | root | control | 1.48 | MC |
| SRR6502108 | root | control | 1.30 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.47 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.09 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.55 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.67 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.49 | MC |
| SRR6441555 | seedling | wild_type | 0.41 | MC |
| SRR2154086 | seedling | wt | 1.61 | MC |
| SRR2154082 | seedling | wt | 1.99 | MC |
| SRR2154083 | seedling | wt | 0.86 | MC |
| SRR2154084 | seedling | wt | 2.62 | MC |
| SRR2154085 | seedling | wt | 1.16 | MC |
| SRR2154087 | seedling | wt | 0.78 | MC |
| SRR3098741 | seedling | wt | 0.88 | MC |
| SRR3098742 | seedling | wt | 0.58 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.67 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.50 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.77 | MC |
| SRR1944583 | seedling | no_treatment | 0.76 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.82 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.26 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.15 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.78 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.88 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.55 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.88 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.59 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.30 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.74 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.33 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.49 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.83 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.37 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.94 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.73 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.47 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.52 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.30 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.70 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.77 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.27 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.67 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.44 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.63 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.26 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.85 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.68 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.29 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.63 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.35 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.53 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.81 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.75 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.64 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.51 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.62 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.61 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.09 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.55 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.71 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.09 | MC |