| SRR7265403 | coleoptile | 2dN | 0.39 | MC |
| SRR7265405 | coleoptile | 2dN | 0.47 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.79 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.79 | MC |
| SRR976168 | flag_leaf | wild_type | 1.41 | MC |
| SRR8060835 | leaf | wild_type | 0.32 | MC |
| SRR8240824 | leaf | wild_type | 0.50 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.93 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.24 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.30 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.59 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.26 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.35 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.46 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.46 | MC |
| SRR1761528 | leaf | drought | 1.46 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.66 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.36 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.50 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.63 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.72 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.79 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.07 | MC |
| SRR6502088 | leaf | control | 0.56 | MC |
| SRR6502089 | leaf | control | 0.42 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.44 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.67 | MC |
| SRR5856927 | leaf | control | 0.25 | MC |
| SRR5856929 | leaf | control | 0.21 | MC |
| SRR5856930 | leaf | salt | 0.36 | MC |
| SRR5856932 | leaf | salt | 0.19 | MC |
| SRR5856934 | leaf | control | 0.26 | MC |
| SRR5856938 | leaf | salt | 0.18 | MC |
| SRR6168979 | leaf | none (control) | 0.44 | MC |
| SRR6168980 | leaf | none (control) | 0.64 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.27 | MC |
| SRR5110430 | panicle | Dawn | 1.42 | MC |
| SRR5110431 | panicle | Dawn | 0.39 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.77 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.52 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.44 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.50 | MC |
| SRR5110445 | panicle | Dusk | 0.61 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.37 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.94 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.44 | MC |
| SRR5126147 | root | "mock,1_day" | 0.57 | MC |
| SRR5126148 | root | "mock,1_day" | 0.44 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.61 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.74 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.17 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 4.57 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.98 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 2.10 | MC |
| SRR5126165 | root | "mock,14_days" | 1.27 | MC |
| SRR5126167 | root | "mock,14_days" | 2.76 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.46 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.75 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.56 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.19 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.70 | MC |
| SRR4947482 | root | Al | 0.80 | MC |
| SRR4947484 | root | Al | 1.48 | MC |
| SRR4947485 | root | Al | 0.69 | MC |
| SRR4947487 | root | control | 0.65 | MC |
| SRR4947492 | root | Al | 0.73 | MC |
| SRR4947494 | root | control | 0.86 | MC |
| SRR4947497 | root | control | 0.65 | MC |
| SRR4947500 | root | Al | 1.16 | MC |
| SRR4947501 | root | Al | 0.51 | MC |
| SRR4947506 | root | Al | 0.84 | MC |
| SRR4947508 | root | Al | 1.07 | MC |
| SRR6502096 | root | control | 0.59 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.36 | MC |
| SRR2154083 | seedling | wt | 0.68 | MC |
| SRR2154084 | seedling | wt | 0.56 | MC |
| SRR2154085 | seedling | wt | 0.49 | MC |
| SRR2154087 | seedling | wt | 0.51 | MC |
| SRR3098741 | seedling | wt | 0.71 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.86 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.28 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.46 | MC |
| SRR358791 | seedling | wt | 2.17 | MC |
| SRR358792 | seedling | wt | 1.40 | MC |
| SRR358793 | seedling | wt | 1.20 | MC |
| SRR358794 | seedling | wt | 1.44 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.57 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.56 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.51 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 3.98 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.54 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.63 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.29 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.49 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.37 | MC |