| SRR4457258 | 2nd_leaf | DAH28 | 0.67 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.49 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.56 | MC |
| SRR6320498 | carpel | wt | 1.97 | MC |
| SRR5560729 | caryopsis | wild_type | 0.68 | MC |
| SRR7265406 | coleoptile | 3dA | 3.31 | MC |
| SRR7265410 | coleoptile | 3dN | 3.29 | MC |
| SRR7265417 | coleoptile | 4dN | 3.72 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.31 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.48 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.53 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.39 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.33 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.44 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.73 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.89 | MC |
| SRR7265374 | embryo | dry seed 0 h | 3.73 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.21 | MC |
| SRR7265377 | embryo | 1hA | 2.42 | MC |
| SRR7265388 | embryo | 12hA | 3.25 | MC |
| SRR7265389 | embryo | 12hA | 4.55 | MC |
| SRR7265390 | embryo | 12hA | 2.91 | MC |
| SRR7265391 | embryo | 12hN | 4.89 | MC |
| SRR7265393 | embryo | 12hN | 2.98 | MC |
| SRR7265394 | embryo | 24hA | 4.14 | MC |
| SRR7265395 | embryo | 24hA | 4.14 | MC |
| SRR7265396 | embryo | 24hA | 4.62 | MC |
| SRR7265397 | embryo | 24hN | 3.10 | MC |
| SRR7265398 | embryo | 24hN | 4.49 | MC |
| SRR7265399 | embryo | 24hN | 3.78 | MC |
| SRR8060836 | leaf | wild_type | 0.26 | MC |
| SRR8060837 | leaf | wild_type | 0.81 | MC |
| SRR8240818 | leaf | wild_type | 0.29 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.95 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.47 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.58 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.48 | MC |
| SRR504365 | leaf | wt | 1.16 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.53 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.04 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.30 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.27 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.36 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.85 | MC |
| SRR5856928 | leaf | control | 0.34 | MC |
| SRR5856929 | leaf | control | 0.23 | MC |
| SRR5856931 | leaf | salt | 0.47 | MC |
| SRR5856933 | leaf | control | 0.26 | MC |
| SRR5856935 | leaf | control | 0.28 | MC |
| SRR5856938 | leaf | salt | 0.67 | MC |
| SRR6168975 | leaf | none (control) | 0.66 | MC |
| SRR6168979 | leaf | none (control) | 1.09 | MC |
| SRR6168980 | leaf | none (control) | 1.11 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.40 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.12 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.91 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.70 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.66 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.77 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.49 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.58 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.92 | MC |
| SRR5126165 | root | "mock,14_days" | 0.79 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.30 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.83 | MC |
| SRR1213695 | root | wt | 0.14 | MC |
| SRR4947480 | root | control | 2.02 | MC |
| SRR4947500 | root | Al | 3.08 | MC |
| SRR2154084 | seedling | wt | 0.47 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.12 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.68 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.61 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.54 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.64 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.12 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.10 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.67 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.32 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.44 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.38 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.64 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.42 | MC |