| SRR358795 | callus | wt | 2.04 | MC |
| SRR4947495 | root | control | 0.86 | MC |
| SRR7265400 | coleoptile | 2dA | 1.78 | MC |
| SRR7265402 | coleoptile | 2dA | 2.27 | MC |
| SRR7265403 | coleoptile | 2dN | 1.32 | MC |
| SRR7265404 | coleoptile | 2dN | 1.66 | MC |
| SRR7265405 | coleoptile | 2dN | 1.09 | MC |
| SRR7265406 | coleoptile | 3dA | 1.77 | MC |
| SRR7265409 | coleoptile | 3dN | 1.14 | MC |
| SRR7265410 | coleoptile | 3dN | 1.70 | MC |
| SRR7265412 | coleoptile | 4dA | 0.73 | MC |
| SRR7265415 | coleoptile | 4dN | 1.80 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.57 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.82 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.90 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.50 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.47 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.68 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.34 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.46 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.44 | MC |
| SRR7265376 | embryo | 1hA | 0.73 | MC |
| SRR7265378 | embryo | 1hA | 0.41 | MC |
| SRR7265380 | embryo | 1hN | 1.33 | MC |
| SRR7265381 | embryo | 1hN | 0.67 | MC |
| SRR7265382 | embryo | 3hA | 2.53 | MC |
| SRR7265383 | embryo | 3hA | 1.50 | MC |
| SRR7265384 | embryo | 3hA | 2.36 | MC |
| SRR7265386 | embryo | 3hN | 1.92 | MC |
| SRR7265387 | embryo | 3hN | 0.32 | MC |
| SRR7265389 | embryo | 12hA | 2.55 | MC |
| SRR7265390 | embryo | 12hA | 1.78 | MC |
| SRR7265391 | embryo | 12hN | 1.77 | MC |
| SRR7265392 | embryo | 12hN | 2.19 | MC |
| SRR7265393 | embryo | 12hN | 1.64 | MC |
| SRR7265394 | embryo | 24hA | 2.34 | MC |
| SRR7265395 | embryo | 24hA | 0.96 | MC |
| SRR7265396 | embryo | 24hA | 2.07 | MC |
| SRR7265397 | embryo | 24hN | 1.07 | MC |
| SRR7265398 | embryo | 24hN | 1.50 | MC |
| SRR7265399 | embryo | 24hN | 2.07 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.36 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.62 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.33 | MC |
| SRR5856929 | leaf | control | 0.25 | MC |
| SRR5856930 | leaf | salt | 0.17 | MC |
| SRR5856932 | leaf | salt | 0.30 | MC |
| SRR5856933 | leaf | control | 0.80 | MC |
| SRR5856934 | leaf | control | 0.63 | MC |
| SRR5856937 | leaf | salt | 0.26 | MC |
| SRR5856938 | leaf | salt | 0.26 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.32 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.43 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.41 | MC |
| SRR5126153 | root | "mock,7_days" | 0.91 | MC |
| SRR5126155 | root | "mock,7_days" | 0.49 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.37 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.37 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.50 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.49 | MC |
| SRR4947479 | root | control | 0.69 | MC |
| SRR4947482 | root | Al | 0.78 | MC |
| SRR4947483 | root | Al | 0.85 | MC |
| SRR4947484 | root | Al | 0.88 | MC |
| SRR4947485 | root | Al | 0.58 | MC |
| SRR4947491 | root | Al | 0.93 | MC |
| SRR4947492 | root | Al | 0.64 | MC |
| SRR4947493 | root | Al | 0.92 | MC |
| SRR4947498 | root | Al | 1.31 | MC |
| SRR4947499 | root | Al | 0.95 | MC |
| SRR4947500 | root | Al | 0.82 | MC |
| SRR4947501 | root | Al | 1.29 | MC |
| SRR4947502 | root | control | 0.70 | MC |
| SRR4947507 | root | Al | 1.01 | MC |
| SRR4947508 | root | Al | 0.87 | MC |
| SRR4947509 | root | Al | 0.60 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.67 | MC |
| SRR6502092 | root | 100 mM NaCl | 1.12 | MC |
| SRR6502096 | root | control | 0.57 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.47 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.21 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.22 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.96 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.45 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.88 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.34 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.90 | MC |
| SRR6441555 | seedling | wild_type | 0.36 | MC |
| SRR2154086 | seedling | wt | 0.92 | MC |
| SRR2154082 | seedling | wt | 0.88 | MC |
| SRR2154084 | seedling | wt | 0.74 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.65 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.76 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.30 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.51 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.33 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.55 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.41 | MC |