| SRR7265401 | coleoptile | 2dA | 0.98 | MC |
| SRR7265402 | coleoptile | 2dA | 0.67 | MC |
| SRR7265412 | coleoptile | 4dA | 1.20 | MC |
| SRR7265413 | coleoptile | 4dA | 0.97 | MC |
| SRR7265414 | coleoptile | 4dA | 0.50 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.44 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.00 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.31 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.87 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.18 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.24 | MC |
| SRR7265379 | embryo | 1hN | 3.25 | MC |
| SRR7265380 | embryo | 1hN | 3.47 | MC |
| SRR7265381 | embryo | 1hN | 2.86 | MC |
| SRR7265385 | embryo | 3hN | 4.26 | MC |
| SRR7265388 | embryo | 12hA | 0.79 | MC |
| SRR7265389 | embryo | 12hA | 0.57 | MC |
| SRR7265390 | embryo | 12hA | 0.94 | MC |
| SRR976168 | flag_leaf | wild_type | 1.63 | MC |
| SRR1213691 | flower | wt | 0.41 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.66 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.63 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.71 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.43 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.00 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.88 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.69 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.46 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.58 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.68 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.66 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.86 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.82 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.84 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.28 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.91 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.94 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.49 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.64 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.28 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.19 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.60 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.88 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.26 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.39 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.51 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 3.55 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.23 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.33 | MC |
| SRR1213692 | leaf | wt | 1.62 | MC |
| SRR1213693 | leaf | wt | 0.93 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.48 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.38 | MC |
| SRR6168975 | leaf | none (control) | 0.42 | MC |
| SRR6168979 | leaf | none (control) | 1.84 | MC |
| SRR6168980 | leaf | none (control) | 1.06 | MC |
| SRR6168981 | leaf | none (control) | 1.06 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.20 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.86 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.51 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.34 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.01 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.73 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.39 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.37 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.35 | MC |
| SRR5126167 | root | "mock,14_days" | 1.11 | MC |
| SRR5126169 | root | "mock,14_days" | 0.39 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.53 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.29 | MC |
| SRR1213695 | root | wt | 1.10 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.60 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.79 | MC |
| SRR2154086 | seedling | wt | 0.44 | MC |
| SRR2154085 | seedling | wt | 0.87 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.21 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.81 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 3.33 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.43 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.12 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.47 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.91 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.81 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.20 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.95 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.48 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.87 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.32 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.31 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.14 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.19 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.58 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.17 | MC |