| SRR4457250 | 2nd_leaf | DAH4 | 0.66 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.40 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.39 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.49 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.61 | MC |
| SRR5560729 | caryopsis | wild_type | 0.34 | MC |
| SRR7265402 | coleoptile | 2dA | 0.33 | MC |
| SRR7265404 | coleoptile | 2dN | 0.43 | MC |
| SRR7265405 | coleoptile | 2dN | 0.28 | MC |
| SRR7265382 | embryo | 3hA | 0.52 | MC |
| SRR7265384 | embryo | 3hA | 0.59 | MC |
| SRR7265386 | embryo | 3hN | 0.35 | MC |
| SRR7265387 | embryo | 3hN | 0.27 | MC |
| SRR7265388 | embryo | 12hA | 0.46 | MC |
| SRR7265390 | embryo | 12hA | 0.55 | MC |
| SRR7265391 | embryo | 12hN | 0.52 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.20 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.31 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.41 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.26 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.69 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.35 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.41 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.39 | MC |
| SRR1213691 | flower | wt | 0.45 | MC |
| SRR8060835 | leaf | wild_type | 0.51 | MC |
| SRR8060837 | leaf | wild_type | 0.59 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.67 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.55 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.41 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.56 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.46 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.34 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.25 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.43 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.45 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.42 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.46 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.45 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.67 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.01 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.92 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.87 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.93 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.06 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.81 | MC |
| SRR1761528 | leaf | drought | 0.72 | MC |
| SRR1761529 | leaf | drought | 2.42 | MC |
| SRR1761530 | leaf | control | 0.94 | MC |
| SRR1761531 | leaf | control | 0.72 | MC |
| SRR504365 | leaf | wt | 0.60 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.41 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.46 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.54 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.47 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.96 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.70 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.62 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.43 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.27 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.61 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.50 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.07 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.44 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.14 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.23 | MC |
| SRR1213693 | leaf | wt | 0.42 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.24 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.21 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.51 | MC |
| SRR6502088 | leaf | control | 0.45 | MC |
| SRR6502089 | leaf | control | 0.87 | MC |
| SRR6502090 | leaf | control | 0.95 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.81 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.78 | MC |
| SRR6502100 | leaf | control | 0.83 | MC |
| SRR6502101 | leaf | control | 1.28 | MC |
| SRR6502102 | leaf | control | 0.57 | MC |
| SRR8582893 | panicle | PM | 0.28 | MC |
| SRR1633182 | panicle | WT | 1.95 | MC |
| SRR1633185 | panicle | WT | 1.62 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.39 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.34 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.52 | MC |
| SRR1213695 | root | wt | 0.18 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.30 | MC |
| SRR6502092 | root | 100 mM NaCl | 1.68 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.81 | MC |
| SRR6502094 | root | control | 1.45 | MC |
| SRR6502095 | root | control | 0.82 | MC |
| SRR6502096 | root | control | 1.40 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.10 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.95 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.25 | MC |
| SRR6502106 | root | control | 0.46 | MC |
| SRR6502107 | root | control | 0.43 | MC |
| SRR6502108 | root | control | 1.69 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.33 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.21 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.59 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.36 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.39 | MC |
| SRR2154086 | seedling | wt | 0.53 | MC |
| SRR2154087 | seedling | wt | 0.72 | MC |
| SRR1944583 | seedling | no_treatment | 0.70 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.84 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.72 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.36 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.22 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.41 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.40 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.28 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.22 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.39 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.41 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.25 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.34 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.40 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.46 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.67 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.34 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.74 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.47 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.23 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 2.57 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 2.52 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 2.25 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.00 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 2.24 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.98 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.34 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.54 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.43 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.53 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.58 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.44 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.70 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 2.16 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 2.37 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.26 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.57 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 2.58 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 2.06 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 3.29 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.01 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.82 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.52 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.32 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.52 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.25 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.16 | MC |