| SRR4457252 | 2nd_leaf | DAH12 | 2.03 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.33 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.35 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.09 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 2.12 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.58 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.99 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.16 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.17 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.11 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.26 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.71 | MC |
| SRR5560727 | caryopsis | wild_type | 0.60 | MC |
| SRR5560728 | caryopsis | wild_type | 0.95 | MC |
| SRR5560729 | caryopsis | wild_type | 0.41 | MC |
| SRR7265400 | coleoptile | 2dA | 0.66 | MC |
| SRR7265401 | coleoptile | 2dA | 0.72 | MC |
| SRR7265402 | coleoptile | 2dA | 1.19 | MC |
| SRR7265405 | coleoptile | 2dN | 0.28 | MC |
| SRR7265406 | coleoptile | 3dA | 1.82 | MC |
| SRR7265407 | coleoptile | 3dA | 1.69 | MC |
| SRR7265408 | coleoptile | 3dA | 1.18 | MC |
| SRR7265412 | coleoptile | 4dA | 2.33 | MC |
| SRR7265413 | coleoptile | 4dA | 3.60 | MC |
| SRR7265414 | coleoptile | 4dA | 2.79 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.11 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.31 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.58 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.07 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.32 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.23 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.42 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.45 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.88 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.83 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.03 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.22 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.98 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.34 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.56 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.11 | MC |
| SRR7265378 | embryo | 1hA | 0.29 | MC |
| SRR7265379 | embryo | 1hN | 1.10 | MC |
| SRR7265381 | embryo | 1hN | 0.69 | MC |
| SRR7265386 | embryo | 3hN | 0.80 | MC |
| SRR2338867 | endosprem | control | 0.48 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.38 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.66 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.26 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.92 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.37 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.45 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.20 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.07 | MC |
| SRR4457241 | flag_leaf | DAH28 | 3.50 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.15 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.19 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.04 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.32 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.95 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.24 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.40 | MC |
| SRR1213691 | flower | wt | 1.63 | MC |
| SRR8060836 | leaf | wild_type | 0.78 | MC |
| SRR8060837 | leaf | wild_type | 0.43 | MC |
| SRR8240825 | leaf | wild_type | 0.72 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.60 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.37 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.75 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.41 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.34 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.45 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.41 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.72 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.95 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.31 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.44 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.67 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.33 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.33 | MC |
| SRR1761529 | leaf | drought | 1.33 | MC |
| SRR504365 | leaf | wt | 0.89 | MC |
| SRR6417969 | leaf | H2O_control | 2.22 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.45 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.09 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 2.98 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.93 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.43 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 2.17 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 2.03 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.16 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.34 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.49 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.79 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.60 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.27 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.48 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.27 | MC |
| SRR1213692 | leaf | wt | 0.59 | MC |
| SRR1213693 | leaf | wt | 0.66 | MC |
| SRR5856927 | leaf | control | 0.20 | MC |
| SRR5856929 | leaf | control | 0.43 | MC |
| SRR5856930 | leaf | salt | 1.19 | MC |
| SRR5856931 | leaf | salt | 0.71 | MC |
| SRR5856933 | leaf | control | 0.68 | MC |
| SRR5856934 | leaf | control | 0.25 | MC |
| SRR5856936 | leaf | salt | 1.05 | MC |
| SRR5856937 | leaf | salt | 1.06 | MC |
| SRR5856938 | leaf | salt | 1.20 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.03 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.20 | MC |
| SRR6168974 | leaf | none (control) | 0.49 | MC |
| SRR6168975 | leaf | none (control) | 0.48 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.51 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.22 | MC |
| SRR6168980 | leaf | none (control) | 0.36 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.39 | MC |
| SRR8582889 | panicle | AM | 0.29 | MC |
| SRR8582890 | panicle | AM | 0.71 | MC |
| SRR8582893 | panicle | PM | 0.33 | MC |
| SRR5110429 | panicle | Dawn | 1.68 | MC |
| SRR5110430 | panicle | Dawn | 1.15 | MC |
| SRR5110431 | panicle | Dawn | 1.52 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.59 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.32 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.63 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.03 | MC |
| SRR5110445 | panicle | Dusk | 0.46 | MC |
| SRR5110446 | panicle | Dusk | 0.50 | MC |
| SRR5110447 | panicle | Dusk | 0.71 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.76 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.41 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.01 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.26 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.99 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.96 | MC |
| SRR5126147 | root | "mock,1_day" | 0.59 | MC |
| SRR5126149 | root | "mock,1_day" | 0.44 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.40 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.08 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.08 | MC |
| SRR5126153 | root | "mock,7_days" | 0.45 | MC |
| SRR5126155 | root | "mock,7_days" | 0.68 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.91 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.65 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.67 | MC |
| SRR5126167 | root | "mock,14_days" | 1.72 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.20 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.12 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.97 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.44 | MC |
| SRR1213695 | root | wt | 0.41 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.43 | MC |
| SRR6441555 | seedling | wild_type | 0.56 | MC |
| SRR2154086 | seedling | wt | 0.48 | MC |
| SRR2154083 | seedling | wt | 0.69 | MC |
| SRR2154087 | seedling | wt | 0.77 | MC |
| SRR3098741 | seedling | wt | 1.58 | MC |
| SRR3098742 | seedling | wt | 0.90 | MC |
| SRR3098743 | seedling | wt | 1.62 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.37 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.41 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.52 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.93 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.76 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.81 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.85 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.28 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.07 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.29 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.85 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.84 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.25 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.09 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.02 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.15 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.05 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.22 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.93 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.56 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.58 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.66 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.50 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.19 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.42 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.24 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.29 | MC |