| SRR4457265 | 2nd_leaf | DAH44 | 0.55 | MC |
| SRR5560727 | caryopsis | wild_type | 0.69 | MC |
| SRR5560728 | caryopsis | wild_type | 0.78 | MC |
| SRR5560729 | caryopsis | wild_type | 0.46 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.79 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.17 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.63 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.33 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.75 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.98 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.26 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.94 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.50 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.99 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.69 | MC |
| SRR1213691 | flower | wt | 0.29 | MC |
| SRR8060835 | leaf | wild_type | 1.64 | MC |
| SRR8060836 | leaf | wild_type | 0.70 | MC |
| SRR8060837 | leaf | wild_type | 1.51 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.19 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.47 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.47 | MC |
| SRR1761531 | leaf | control | 0.47 | MC |
| SRR504365 | leaf | wt | 0.26 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.22 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.31 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.23 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.53 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.14 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.78 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.31 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.45 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.02 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.71 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.33 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.28 | MC |
| SRR1213692 | leaf | wt | 0.38 | MC |
| SRR6502089 | leaf | control | 0.34 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.70 | MC |
| SRR6168974 | leaf | none (control) | 4.57 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.65 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.93 | MC |
| SRR6168979 | leaf | none (control) | 0.37 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.46 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.52 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.23 | MC |
| SRR8582891 | panicle | PM | 0.77 | MC |
| SRR8582893 | panicle | PM | 0.56 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.48 | MC |
| SRR5110445 | panicle | Dusk | 0.70 | MC |
| SRR5110446 | panicle | Dusk | 0.33 | MC |
| SRR5110447 | panicle | Dusk | 0.33 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.63 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.54 | MC |
| SRR1633182 | panicle | WT | 0.65 | MC |
| SRR1633185 | panicle | WT | 2.12 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.59 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.92 | MC |
| SRR1213695 | root | wt | 0.20 | MC |
| SRR6441554 | seedling | wild_type | 0.61 | MC |
| SRR6441555 | seedling | wild_type | 0.48 | MC |
| SRR2154085 | seedling | wt | 0.60 | MC |
| SRR3098741 | seedling | wt | 0.19 | MC |
| SRR3098743 | seedling | wt | 0.38 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.68 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.62 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.61 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.29 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.20 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.30 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.51 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.49 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.33 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.66 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.38 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.41 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.44 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.34 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.46 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.37 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.55 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.57 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.27 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.71 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.51 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.86 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.47 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.47 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.25 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.19 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.27 | MC |