| SRR4457261 | 2nd_leaf | DAH36 | 4.45 | MC |
| SRR3745125 | anther | wt | 1.54 | MC |
| SRR3745126 | anther | wt | 1.40 | MC |
| SRR3745127 | anther | wt | 1.51 | MC |
| SRR5560727 | caryopsis | wild_type | 1.60 | MC |
| SRR5560728 | caryopsis | wild_type | 3.99 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.16 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.31 | MC |
| SRR2338866 | endosprem | control | 2.90 | MC |
| SRR2338867 | endosprem | control | 2.03 | MC |
| SRR2338869 | endosprem | high_temperature | 2.36 | MC |
| SRR976168 | flag_leaf | wild_type | 1.94 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.55 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.03 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.26 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.46 | MC |
| SRR8060835 | leaf | wild_type | 2.16 | MC |
| SRR8060836 | leaf | wild_type | 1.67 | MC |
| SRR8060837 | leaf | wild_type | 1.69 | MC |
| SRR8240824 | leaf | wild_type | 2.53 | MC |
| SRR8240825 | leaf | wild_type | 2.39 | MC |
| SRR8240826 | leaf | wild_type | 2.16 | MC |
| SRR8240818 | leaf | wild_type | 2.03 | MC |
| SRR8240819 | leaf | wild_type | 2.30 | MC |
| SRR8240820 | leaf | wild_type | 1.89 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.62 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 2.94 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.69 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.74 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.11 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.18 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.23 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.61 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.30 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.52 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.57 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.67 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.98 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.74 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.63 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.32 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.60 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.72 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.87 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.28 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.65 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.74 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.29 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.54 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.88 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.90 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.62 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.23 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.89 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 4.37 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.66 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 2.76 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.74 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.26 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.74 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.26 | MC |
| SRR1761530 | leaf | control | 2.74 | MC |
| SRR1761531 | leaf | control | 2.26 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.66 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.30 | MC |
| SRR6417968 | leaf | H2O_control | 1.50 | MC |
| SRR6417969 | leaf | H2O_control | 2.56 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.13 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 3.87 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 4.00 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.66 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.39 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.58 | MC |
| SRR8611900 | leaf | Non-inoculated | 3.40 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.99 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.94 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.32 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.46 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.80 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.38 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.77 | MC |
| SRR1213692 | leaf | wt | 2.62 | MC |
| SRR1213693 | leaf | wt | 3.04 | MC |
| SRR6502089 | leaf | control | 3.13 | MC |
| SRR6502100 | leaf | control | 3.00 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 1.42 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.65 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.04 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 4.36 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.59 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.50 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.12 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 1.68 | MC |
| SRR6168973 | leaf | none (control) | 1.81 | MC |
| SRR6168974 | leaf | none (control) | 1.34 | MC |
| SRR6168975 | leaf | none (control) | 2.49 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.69 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.75 | MC |
| SRR6168979 | leaf | none (control) | 1.76 | MC |
| SRR6168980 | leaf | none (control) | 0.94 | MC |
| SRR6168981 | leaf | none (control) | 1.78 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.66 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.16 | MC |
| SRR8582888 | panicle | AM | 0.35 | MC |
| SRR8582889 | panicle | AM | 0.42 | MC |
| SRR8582891 | panicle | PM | 1.50 | MC |
| SRR8582893 | panicle | PM | 1.68 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.91 | MC |
| SRR1633182 | panicle | WT | 4.70 | MC |
| SRR1633185 | panicle | WT | 5.87 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 5.48 | MC |
| SRR5126147 | root | "mock,1_day" | 3.38 | MC |
| SRR5126148 | root | "mock,1_day" | 3.23 | MC |
| SRR5126149 | root | "mock,1_day" | 2.33 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.13 | MC |
| SRR5126153 | root | "mock,7_days" | 4.14 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.50 | MC |
| SRR1213695 | root | wt | 2.73 | MC |
| SRR4947480 | root | control | 4.42 | MC |
| SRR4947481 | root | control | 5.27 | MC |
| SRR4947488 | root | control | 4.61 | MC |
| SRR4947491 | root | Al | 3.30 | MC |
| SRR4947493 | root | Al | 2.87 | MC |
| SRR4947505 | root | control | 4.46 | MC |
| SRR4947509 | root | Al | 2.52 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.74 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.43 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.60 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.84 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.39 | MC |
| SRR1740428 | root_meristematic_zone | wt | 4.91 | MC |
| SRR1740429 | root_meristematic_zone | wt | 3.54 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.49 | MC |
| SRR6441554 | seedling | wild_type | 1.34 | MC |
| SRR6441555 | seedling | wild_type | 2.75 | MC |
| SRR2154086 | seedling | wt | 3.96 | MC |
| SRR3098741 | seedling | wt | 1.53 | MC |
| SRR3098743 | seedling | wt | 1.06 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.79 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.76 | MC |
| SRR1944583 | seedling | no_treatment | 4.37 | MC |
| SRR358791 | seedling | wt | 3.76 | MC |
| SRR358792 | seedling | wt | 3.97 | MC |
| SRR358793 | seedling | wt | 1.76 | MC |
| SRR358794 | seedling | wt | 1.60 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.19 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.70 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.07 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.07 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.85 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.67 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.79 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.03 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.34 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.43 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.61 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.78 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.75 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.02 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.50 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.03 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.88 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.24 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.38 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.05 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.75 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.35 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.38 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.37 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.57 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.09 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.29 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.61 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.22 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.33 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.05 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 5.05 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 6.05 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 2.50 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.85 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 5.10 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.68 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 4.95 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.44 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 4.77 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 4.36 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 5.24 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 5.03 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 3.18 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 5.71 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 3.90 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 4.18 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 4.96 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.01 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 4.83 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 4.18 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 4.54 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 6.28 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.82 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 7.62 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.25 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.75 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 4.61 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 4.23 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.01 | MC |