| SRR5560727 | caryopsis | wild_type | 1.39 | MC |
| SRR5560728 | caryopsis | wild_type | 0.48 | MC |
| SRR5560729 | caryopsis | wild_type | 0.59 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.02 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.79 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.77 | MC |
| SRR7265403 | coleoptile | 2dN | 0.41 | MC |
| SRR7265411 | coleoptile | 3dN | 0.42 | MC |
| SRR7265416 | coleoptile | 4dN | 0.69 | MC |
| SRR7265417 | coleoptile | 4dN | 0.48 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.34 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.33 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.72 | MC |
| SRR8060836 | leaf | wild_type | 0.62 | MC |
| SRR8240824 | leaf | wild_type | 1.22 | MC |
| SRR8240825 | leaf | wild_type | 1.40 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.91 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.37 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.84 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.06 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.61 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.56 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.72 | MC |
| SRR504365 | leaf | wt | 0.22 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.30 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.31 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.37 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.41 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.72 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.39 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.59 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.33 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.81 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.59 | MC |
| SRR1213692 | leaf | wt | 0.60 | MC |
| SRR6502088 | leaf | control | 0.36 | MC |
| SRR6502089 | leaf | control | 0.59 | MC |
| SRR6502090 | leaf | control | 0.46 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.41 | MC |
| SRR6502100 | leaf | control | 0.70 | MC |
| SRR6502101 | leaf | control | 0.36 | MC |
| SRR6502102 | leaf | control | 0.51 | MC |
| SRR5856930 | leaf | salt | 0.20 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 0.89 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.85 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.85 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.84 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.51 | MC |
| SRR8582889 | panicle | AM | 0.12 | MC |
| SRR8582893 | panicle | PM | 1.40 | MC |
| SRR5110432 | panicle | Dawn | 0.42 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.73 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.89 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 0.90 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.70 | MC |
| SRR5110447 | panicle | Dusk | 0.58 | MC |
| SRR5110448 | panicle | Dusk | 1.09 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.44 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.37 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.38 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.49 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.40 | MC |
| SRR1633182 | panicle | WT | 0.66 | MC |
| SRR1633185 | panicle | WT | 0.67 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.76 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.43 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.34 | MC |
| SRR1213695 | root | wt | 0.15 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.24 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.19 | MC |
| SRR6441555 | seedling | wild_type | 1.29 | MC |
| SRR2154086 | seedling | wt | 1.53 | MC |
| SRR2154083 | seedling | wt | 1.07 | MC |
| SRR2154084 | seedling | wt | 1.75 | MC |
| SRR2154085 | seedling | wt | 1.62 | MC |
| SRR2154087 | seedling | wt | 1.32 | MC |
| SRR3098741 | seedling | wt | 1.15 | MC |
| SRR3098742 | seedling | wt | 2.62 | MC |
| SRR3098743 | seedling | wt | 1.71 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.37 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.89 | MC |
| SRR1944583 | seedling | no_treatment | 1.10 | MC |
| SRR358792 | seedling | wt | 1.71 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.84 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.36 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.58 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.34 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.44 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.66 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.15 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.72 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.09 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.40 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.45 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.46 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.21 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.66 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.90 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.39 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.77 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.85 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.49 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.42 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.10 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.48 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.08 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.16 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.64 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 1.38 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.01 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 3.42 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 3.61 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.50 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.66 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.32 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 2.36 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 1.33 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.27 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 3.47 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 3.58 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.04 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 7.08 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 4.20 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.94 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 4.73 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 6.31 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 5.11 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.86 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.02 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.35 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.02 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.40 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.77 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.81 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.98 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.91 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.48 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.92 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.58 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.22 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.05 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.97 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.00 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.03 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.46 | MC |