| SRR358795 | callus | wt | 9.45 | MC |
| SRR358798 | callus | wt | 1.96 | MC |
| SRR6320473 | carpel | wt | 5.69 | MC |
| SRR6320498 | carpel | wt | 4.57 | MC |
| SRR5560728 | caryopsis | wild_type | 0.39 | MC |
| SRR7265410 | coleoptile | 3dN | 2.10 | MC |
| SRR7265411 | coleoptile | 3dN | 2.89 | MC |
| SRR7265412 | coleoptile | 4dA | 1.57 | MC |
| SRR7265413 | coleoptile | 4dA | 4.01 | MC |
| SRR7265414 | coleoptile | 4dA | 0.62 | MC |
| SRR7265416 | coleoptile | 4dN | 3.84 | MC |
| SRR7265417 | coleoptile | 4dN | 1.96 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 4.25 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.69 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.27 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.22 | MC |
| SRR7265378 | embryo | 1hA | 0.64 | MC |
| SRR7265379 | embryo | 1hN | 0.63 | MC |
| SRR7265381 | embryo | 1hN | 0.47 | MC |
| SRR7265382 | embryo | 3hA | 2.43 | MC |
| SRR7265384 | embryo | 3hA | 2.04 | MC |
| SRR7265385 | embryo | 3hN | 0.79 | MC |
| SRR7265386 | embryo | 3hN | 0.31 | MC |
| SRR7265387 | embryo | 3hN | 0.31 | MC |
| SRR7265391 | embryo | 12hN | 2.80 | MC |
| SRR7265393 | embryo | 12hN | 2.86 | MC |
| SRR7265398 | embryo | 24hN | 4.26 | MC |
| SRR976168 | flag_leaf | wild_type | 0.47 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.44 | MC |
| SRR1213691 | flower | wt | 0.51 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.32 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.42 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.47 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.47 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.41 | MC |
| SRR5856927 | leaf | control | 2.27 | MC |
| SRR5856929 | leaf | control | 1.93 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 1.18 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 1.21 | MC |
| SRR6168973 | leaf | none (control) | 2.62 | MC |
| SRR6168974 | leaf | none (control) | 3.23 | MC |
| SRR6168975 | leaf | none (control) | 1.25 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.81 | MC |
| SRR6168980 | leaf | none (control) | 0.27 | MC |
| SRR6168981 | leaf | none (control) | 0.73 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 2.12 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.18 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.92 | MC |
| SRR5110429 | panicle | Dawn | 1.23 | MC |
| SRR5110430 | panicle | Dawn | 1.45 | MC |
| SRR5110431 | panicle | Dawn | 1.36 | MC |
| SRR5110432 | panicle | Dawn | 0.48 | MC |
| SRR4947496 | root | control | 1.54 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.00 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.59 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.64 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.50 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.91 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.37 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.24 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.00 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.07 | MC |
| SRR5110445 | panicle | Dusk | 0.94 | MC |
| SRR5110446 | panicle | Dusk | 1.38 | MC |
| SRR5110447 | panicle | Dusk | 0.60 | MC |
| SRR5110448 | panicle | Dusk | 1.76 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.71 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.37 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.82 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.56 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.14 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.00 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.93 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.30 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 4.27 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 2.72 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.38 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.00 | MC |
| SRR5126147 | root | "mock,1_day" | 0.58 | MC |
| SRR5126148 | root | "mock,1_day" | 0.50 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.56 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.41 | MC |
| SRR5126153 | root | "mock,7_days" | 0.77 | MC |
| SRR5126155 | root | "mock,7_days" | 0.78 | MC |
| SRR5126157 | root | "mock,7_days" | 0.43 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.47 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.61 | MC |
| SRR5126165 | root | "mock,14_days" | 0.55 | MC |
| SRR5126167 | root | "mock,14_days" | 0.55 | MC |
| SRR5126169 | root | "mock,14_days" | 0.53 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.79 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.43 | MC |
| SRR1213694 | root | wt | 0.81 | MC |
| SRR4947479 | root | control | 1.88 | MC |
| SRR4947480 | root | control | 2.02 | MC |
| SRR4947481 | root | control | 3.36 | MC |
| SRR4947483 | root | Al | 2.10 | MC |
| SRR4947484 | root | Al | 2.80 | MC |
| SRR4947485 | root | Al | 3.46 | MC |
| SRR4947487 | root | control | 2.64 | MC |
| SRR4947488 | root | control | 2.79 | MC |
| SRR4947489 | root | control | 3.95 | MC |
| SRR4947492 | root | Al | 4.32 | MC |
| SRR4947493 | root | Al | 3.09 | MC |
| SRR4947494 | root | control | 3.39 | MC |
| SRR4947504 | root | control | 1.36 | MC |
| SRR4947505 | root | control | 2.38 | MC |
| SRR4947506 | root | Al | 3.99 | MC |
| SRR4947508 | root | Al | 2.96 | MC |
| SRR4947509 | root | Al | 4.14 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.63 | MC |
| SRR6502092 | root | 100 mM NaCl | 1.31 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.86 | MC |
| SRR6502094 | root | control | 0.48 | MC |
| SRR6502095 | root | control | 0.52 | MC |
| SRR6502096 | root | control | 0.39 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.26 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.86 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.57 | MC |
| SRR6502106 | root | control | 0.46 | MC |
| SRR6502107 | root | control | 0.40 | MC |
| SRR6502108 | root | control | 1.05 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.30 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.47 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.57 | MC |
| SRR1740431 | root_elongation_zone | wt | 3.52 | MC |
| SRR1740428 | root_meristematic_zone | wt | 3.82 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.75 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.27 | MC |
| SRR6441554 | seedling | wild_type | 0.28 | MC |
| SRR3098741 | seedling | wt | 0.28 | MC |
| SRR3098742 | seedling | wt | 0.39 | MC |
| SRR3098743 | seedling | wt | 0.28 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.48 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.34 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.82 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.31 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.45 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.46 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.32 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.86 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 3.12 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.85 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 4.17 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 4.84 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 5.34 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 5.49 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.86 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 4.25 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 5.40 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 5.66 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 4.71 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 3.75 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 4.05 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 3.33 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 3.25 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 3.05 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 3.75 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 5.05 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 3.91 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 4.21 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 10.44 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.72 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.44 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.56 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.55 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.17 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 2.47 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.87 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.64 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.70 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.16 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.86 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.59 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.15 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.19 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.40 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.44 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.78 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.90 | MC |