| SRR6320498 | carpel | wt | 2.19 | MC |
| SRR5560727 | caryopsis | wild_type | 0.75 | MC |
| SRR5560728 | caryopsis | wild_type | 0.52 | MC |
| SRR5560729 | caryopsis | wild_type | 0.38 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.69 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.81 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.03 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.80 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.22 | MC |
| SRR7265397 | embryo | 24hN | 0.95 | MC |
| SRR7265398 | embryo | 24hN | 0.58 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.39 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.54 | MC |
| SRR8060835 | leaf | wild_type | 1.02 | MC |
| SRR8060836 | leaf | wild_type | 0.40 | MC |
| SRR8060837 | leaf | wild_type | 0.88 | MC |
| SRR8240825 | leaf | wild_type | 0.43 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.19 | MC |
| SRR504365 | leaf | wt | 0.24 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.21 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.60 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.93 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.27 | MC |
| SRR1213693 | leaf | wt | 0.55 | MC |
| SRR5856927 | leaf | control | 0.27 | MC |
| SRR5856933 | leaf | control | 0.23 | MC |
| SRR5856934 | leaf | control | 0.52 | MC |
| SRR5856937 | leaf | salt | 0.60 | MC |
| SRR5856938 | leaf | salt | 0.44 | MC |
| SRR6168973 | leaf | none (control) | 0.66 | MC |
| SRR6168975 | leaf | none (control) | 0.33 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.38 | MC |
| SRR6168981 | leaf | none (control) | 0.51 | MC |
| SRR8582893 | panicle | PM | 0.32 | MC |
| SRR5110432 | panicle | Dawn | 0.69 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.37 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.96 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.75 | MC |
| SRR5126147 | root | "mock,1_day" | 0.82 | MC |
| SRR5126148 | root | "mock,1_day" | 0.47 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.80 | MC |
| SRR5126153 | root | "mock,7_days" | 0.45 | MC |
| SRR5126155 | root | "mock,7_days" | 0.88 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.10 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.87 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.63 | MC |
| SRR5126169 | root | "mock,14_days" | 0.73 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.38 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.56 | MC |
| SRR1213695 | root | wt | 0.13 | MC |
| SRR4947478 | root | control | 0.55 | MC |
| SRR4947501 | root | Al | 0.70 | MC |
| SRR4947506 | root | Al | 0.58 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.10 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.38 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.32 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.30 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.95 | MC |
| SRR6441554 | seedling | wild_type | 0.35 | MC |
| SRR2154084 | seedling | wt | 0.49 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.46 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.31 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.47 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.83 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.74 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.74 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.92 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.17 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.09 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.90 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.24 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.09 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.83 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.88 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.69 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.24 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.44 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.23 | MC |