| SRR5560727 | caryopsis | wild_type | 1.10 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.18 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.49 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.01 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.69 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.39 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.73 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.40 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.26 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.26 | MC |
| SRR1761531 | leaf | control | 3.26 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.92 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.28 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.18 | MC |
| SRR8611900 | leaf | Non-inoculated | 3.18 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.44 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.36 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.46 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.50 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.59 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 4.96 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.31 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.66 | MC |
| SRR8582891 | panicle | PM | 1.76 | MC |
| SRR5126149 | root | "mock,1_day" | 2.48 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.71 | MC |
| SRR5126155 | root | "mock,7_days" | 0.43 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.57 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.38 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.63 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.60 | MC |
| SRR1213694 | root | wt | 1.19 | MC |
| SRR4947501 | root | Al | 0.63 | MC |
| SRR6502095 | root | control | 1.14 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.89 | MC |
| SRR6441554 | seedling | wild_type | 1.28 | MC |
| SRR2154086 | seedling | wt | 0.51 | MC |
| SRR3098743 | seedling | wt | 2.10 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.65 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.51 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.77 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.74 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.93 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.03 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.93 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 4.96 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 7.30 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 7.63 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 5.62 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 7.05 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.40 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.43 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.82 | MC |