| SRR4457252 | 2nd_leaf | DAH12 | 0.29 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.70 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.01 | MC |
| SRR7265373 | embryo | dry seed 0 h | 3.11 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.73 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.46 | MC |
| SRR7265376 | embryo | 1hA | 1.25 | MC |
| SRR7265377 | embryo | 1hA | 2.84 | MC |
| SRR7265378 | embryo | 1hA | 0.73 | MC |
| SRR7265379 | embryo | 1hN | 1.65 | MC |
| SRR7265380 | embryo | 1hN | 0.85 | MC |
| SRR7265381 | embryo | 1hN | 3.01 | MC |
| SRR7265382 | embryo | 3hA | 0.99 | MC |
| SRR7265383 | embryo | 3hA | 1.02 | MC |
| SRR7265384 | embryo | 3hA | 1.38 | MC |
| SRR7265385 | embryo | 3hN | 2.48 | MC |
| SRR7265386 | embryo | 3hN | 0.88 | MC |
| SRR7265387 | embryo | 3hN | 0.62 | MC |
| SRR7265391 | embryo | 12hN | 1.25 | MC |
| SRR7265393 | embryo | 12hN | 0.56 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.82 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.69 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.21 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.94 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.16 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.82 | MC |
| SRR8060835 | leaf | wild_type | 2.18 | MC |
| SRR8060836 | leaf | wild_type | 1.74 | MC |
| SRR8060837 | leaf | wild_type | 1.51 | MC |
| SRR8240826 | leaf | wild_type | 0.21 | MC |
| SRR8240818 | leaf | wild_type | 0.43 | MC |
| SRR8240820 | leaf | wild_type | 0.46 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.59 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.94 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.30 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.05 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.53 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.40 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.40 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.42 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.86 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.39 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.45 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.32 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.59 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.66 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.20 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.61 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.83 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.69 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.67 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.56 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.90 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.50 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.57 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.89 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.50 | MC |
| SRR1761528 | leaf | drought | 2.56 | MC |
| SRR1761529 | leaf | drought | 0.90 | MC |
| SRR1761531 | leaf | control | 0.50 | MC |
| SRR504365 | leaf | wt | 0.23 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.79 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.79 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.75 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.65 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.39 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.28 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.91 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.74 | MC |
| SRR1213692 | leaf | wt | 0.83 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.10 | MC |
| SRR6502088 | leaf | control | 1.14 | MC |
| SRR6502089 | leaf | control | 0.49 | MC |
| SRR6502090 | leaf | control | 0.67 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.45 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.02 | MC |
| SRR5856931 | leaf | salt | 0.22 | MC |
| SRR5856932 | leaf | salt | 0.61 | MC |
| SRR5856936 | leaf | salt | 0.39 | MC |
| SRR5856937 | leaf | salt | 0.72 | MC |
| SRR5856938 | leaf | salt | 0.80 | MC |
| SRR8582891 | panicle | PM | 0.82 | MC |
| SRR8582892 | panicle | PM | 1.27 | MC |
| SRR8582893 | panicle | PM | 0.24 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.28 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.77 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.52 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.54 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.89 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.57 | MC |
| SRR5126165 | root | "mock,14_days" | 0.55 | MC |
| SRR5126167 | root | "mock,14_days" | 0.56 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.37 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.75 | MC |
| SRR4947483 | root | Al | 1.24 | MC |
| SRR4947490 | root | Al | 0.60 | MC |
| SRR4947506 | root | Al | 0.53 | MC |
| SRR6502094 | root | control | 0.83 | MC |
| SRR6502096 | root | control | 1.60 | MC |
| SRR6502107 | root | control | 0.60 | MC |
| SRR6502108 | root | control | 0.45 | MC |
| SRR6441555 | seedling | wild_type | 0.25 | MC |
| SRR2154086 | seedling | wt | 0.91 | MC |
| SRR2154083 | seedling | wt | 0.56 | MC |
| SRR2154085 | seedling | wt | 0.50 | MC |
| SRR2154087 | seedling | wt | 0.54 | MC |
| SRR3098741 | seedling | wt | 0.32 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.29 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.85 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.01 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.68 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.57 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.55 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.21 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.59 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.53 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.28 | MC |