| SRR4457249 | 2nd_leaf | DAH4 | 3.58 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.45 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.59 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.48 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.44 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.91 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.03 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.76 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 3.56 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.38 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 3.80 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 2.79 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 3.92 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 5.34 | MC |
| SRR3745127 | anther | wt | 0.56 | MC |
| SRR358795 | callus | wt | 5.84 | MC |
| SRR358796 | callus | wt | 4.70 | MC |
| SRR358797 | callus | wt | 4.87 | MC |
| SRR358798 | callus | wt | 4.54 | MC |
| SRR6320473 | carpel | wt | 3.76 | MC |
| SRR6320498 | carpel | wt | 2.71 | MC |
| SRR5560727 | caryopsis | wild_type | 5.01 | MC |
| SRR5560728 | caryopsis | wild_type | 3.50 | MC |
| SRR5560729 | caryopsis | wild_type | 5.09 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.47 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.51 | MC |
| SRR4947495 | root | control | 2.88 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.92 | MC |
| SRR7265400 | coleoptile | 2dA | 1.17 | MC |
| SRR7265401 | coleoptile | 2dA | 0.91 | MC |
| SRR7265402 | coleoptile | 2dA | 1.05 | MC |
| SRR7265403 | coleoptile | 2dN | 1.38 | MC |
| SRR7265405 | coleoptile | 2dN | 1.26 | MC |
| SRR7265407 | coleoptile | 3dA | 0.82 | MC |
| SRR7265408 | coleoptile | 3dA | 0.68 | MC |
| SRR7265410 | coleoptile | 3dN | 1.11 | MC |
| SRR7265411 | coleoptile | 3dN | 0.89 | MC |
| SRR7265414 | coleoptile | 4dA | 0.86 | MC |
| SRR7265416 | coleoptile | 4dN | 0.65 | MC |
| SRR7265417 | coleoptile | 4dN | 1.00 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.55 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.67 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.85 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.05 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.16 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.85 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.42 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.15 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 3.25 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.48 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.67 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.32 | MC |
| SRR7265376 | embryo | 1hA | 1.48 | MC |
| SRR7265377 | embryo | 1hA | 1.67 | MC |
| SRR7265380 | embryo | 1hN | 1.41 | MC |
| SRR7265381 | embryo | 1hN | 1.54 | MC |
| SRR7265383 | embryo | 3hA | 1.13 | MC |
| SRR7265384 | embryo | 3hA | 1.04 | MC |
| SRR7265385 | embryo | 3hN | 1.05 | MC |
| SRR7265386 | embryo | 3hN | 0.71 | MC |
| SRR7265387 | embryo | 3hN | 0.81 | MC |
| SRR7265388 | embryo | 12hA | 1.21 | MC |
| SRR7265389 | embryo | 12hA | 1.15 | MC |
| SRR7265390 | embryo | 12hA | 1.22 | MC |
| SRR7265391 | embryo | 12hN | 1.93 | MC |
| SRR7265392 | embryo | 12hN | 1.88 | MC |
| SRR7265393 | embryo | 12hN | 0.80 | MC |
| SRR7265394 | embryo | 24hA | 1.03 | MC |
| SRR7265395 | embryo | 24hA | 1.52 | MC |
| SRR7265396 | embryo | 24hA | 1.09 | MC |
| SRR7265398 | embryo | 24hN | 1.14 | MC |
| SRR7265399 | embryo | 24hN | 1.14 | MC |
| SRR2338866 | endosprem | control | 1.48 | MC |
| SRR2338867 | endosprem | control | 1.11 | MC |
| SRR2338868 | endosprem | high_temperature | 1.43 | MC |
| SRR2338869 | endosprem | high_temperature | 1.23 | MC |
| SRR976168 | flag_leaf | wild_type | 1.08 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.03 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.22 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.38 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.86 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.48 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.55 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.42 | MC |
| SRR4457241 | flag_leaf | DAH28 | 3.04 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.51 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.51 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.39 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.93 | MC |
| SRR8240825 | leaf | wild_type | 2.04 | MC |
| SRR8240826 | leaf | wild_type | 2.24 | MC |
| SRR8240818 | leaf | wild_type | 1.82 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.92 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.59 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.57 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.25 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.62 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.84 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.03 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.89 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.43 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.09 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.11 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.22 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.15 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.87 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.18 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.65 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.08 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.23 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.92 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.35 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.06 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.70 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.48 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.84 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 4.78 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 4.39 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 4.78 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 4.39 | MC |
| SRR1761530 | leaf | control | 4.78 | MC |
| SRR1761531 | leaf | control | 4.39 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.97 | MC |
| SRR6417967 | leaf | H2O_control | 3.20 | MC |
| SRR6417968 | leaf | H2O_control | 3.05 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.16 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.92 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.78 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 2.77 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.21 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.14 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.08 | MC |
| SRR5856927 | leaf | control | 1.15 | MC |
| SRR5856928 | leaf | control | 1.32 | MC |
| SRR5856929 | leaf | control | 1.45 | MC |
| SRR5856933 | leaf | control | 1.42 | MC |
| SRR5856934 | leaf | control | 1.24 | MC |
| SRR5856936 | leaf | salt | 0.88 | MC |
| SRR5856937 | leaf | salt | 0.85 | MC |
| SRR5856938 | leaf | salt | 0.60 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 5.12 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 7.57 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.97 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.99 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 4.96 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 3.34 | MC |
| SRR6168975 | leaf | none (control) | 4.67 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.50 | MC |
| SRR6168979 | leaf | none (control) | 1.18 | MC |
| SRR6168981 | leaf | none (control) | 1.41 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.46 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.70 | MC |
| SRR8582888 | panicle | AM | 1.81 | MC |
| SRR8582890 | panicle | AM | 1.55 | MC |
| SRR5110430 | panicle | Dawn | 2.19 | MC |
| SRR5110431 | panicle | Dawn | 3.03 | MC |
| SRR5110432 | panicle | Dawn | 3.66 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 4.25 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 4.22 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.45 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.66 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 5.09 | MC |
| SRR5110448 | panicle | Dusk | 4.71 | MC |
| SRR5110449 | panicle | Dawn + 14h | 4.80 | MC |
| SRR5110450 | panicle | Dawn + 14h | 4.07 | MC |
| SRR5110452 | panicle | Dawn + 14h | 5.09 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 5.07 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.38 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.49 | MC |
| SRR5110460 | panicle | Dawn + 21h | 2.56 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.70 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.46 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 2.77 | MC |
| SRR5126147 | root | "mock,1_day" | 1.99 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.81 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.21 | MC |
| SRR5126153 | root | "mock,7_days" | 2.49 | MC |
| SRR5126155 | root | "mock,7_days" | 2.24 | MC |
| SRR5126157 | root | "mock,7_days" | 2.07 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.29 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.37 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 2.20 | MC |
| SRR5126167 | root | "mock,14_days" | 1.12 | MC |
| SRR5126169 | root | "mock,14_days" | 2.31 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.01 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.45 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.17 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.54 | MC |
| SRR1213694 | root | wt | 2.40 | MC |
| SRR4947478 | root | control | 2.29 | MC |
| SRR4947479 | root | control | 2.29 | MC |
| SRR4947480 | root | control | 2.33 | MC |
| SRR4947481 | root | control | 2.72 | MC |
| SRR4947482 | root | Al | 1.18 | MC |
| SRR4947483 | root | Al | 2.21 | MC |
| SRR4947484 | root | Al | 1.93 | MC |
| SRR4947485 | root | Al | 1.81 | MC |
| SRR4947487 | root | control | 1.70 | MC |
| SRR4947488 | root | control | 2.75 | MC |
| SRR4947489 | root | control | 2.47 | MC |
| SRR4947490 | root | Al | 2.55 | MC |
| SRR4947491 | root | Al | 2.74 | MC |
| SRR4947492 | root | Al | 2.03 | MC |
| SRR4947493 | root | Al | 2.09 | MC |
| SRR4947494 | root | control | 2.81 | MC |
| SRR4947497 | root | control | 2.32 | MC |
| SRR4947498 | root | Al | 3.58 | MC |
| SRR4947499 | root | Al | 3.06 | MC |
| SRR4947500 | root | Al | 2.04 | MC |
| SRR4947501 | root | Al | 2.44 | MC |
| SRR4947502 | root | control | 3.13 | MC |
| SRR4947503 | root | control | 2.27 | MC |
| SRR4947504 | root | control | 2.87 | MC |
| SRR4947505 | root | control | 3.18 | MC |
| SRR4947506 | root | Al | 1.93 | MC |
| SRR4947507 | root | Al | 2.63 | MC |
| SRR4947509 | root | Al | 2.64 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.48 | MC |
| SRR6502093 | root | 100 mM NaCl | 4.78 | MC |
| SRR6502095 | root | control | 4.28 | MC |
| SRR6502096 | root | control | 3.20 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.47 | MC |
| SRR6502107 | root | control | 1.71 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.82 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.08 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.74 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.66 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.13 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.13 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.79 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.46 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.15 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.91 | MC |
| SRR358793 | seedling | wt | 5.55 | MC |
| SRR358794 | seedling | wt | 5.02 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.53 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.18 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 13.42 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.41 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.23 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.17 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.25 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.18 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 6.07 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 6.81 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.59 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 7.38 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 5.20 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 6.89 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 5.66 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 7.28 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 5.89 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 6.67 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 7.34 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 6.51 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 6.31 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 5.76 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 6.08 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 6.49 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 6.92 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 6.22 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 7.01 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 7.69 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 10.90 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 5.36 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.91 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 5.02 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 6.70 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 3.02 | MC |