| SRR6320498 | carpel | wt | 1.30 | MC |
| SRR4947495 | root | control | 0.73 | MC |
| SRR7265401 | coleoptile | 2dA | 0.36 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.70 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.27 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.39 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.01 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.77 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.60 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.29 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.79 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.42 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.10 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.27 | MC |
| SRR2338866 | endosprem | control | 3.63 | MC |
| SRR2338868 | endosprem | high_temperature | 1.74 | MC |
| SRR2338869 | endosprem | high_temperature | 1.12 | MC |
| SRR5856927 | leaf | control | 0.20 | MC |
| SRR5856928 | leaf | control | 0.33 | MC |
| SRR5856929 | leaf | control | 0.32 | MC |
| SRR5856931 | leaf | salt | 0.24 | MC |
| SRR5856933 | leaf | control | 0.51 | MC |
| SRR5856934 | leaf | control | 0.37 | MC |
| SRR5856935 | leaf | control | 0.38 | MC |
| SRR5856936 | leaf | salt | 0.17 | MC |
| SRR5856937 | leaf | salt | 0.17 | MC |
| SRR5856938 | leaf | salt | 0.15 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 1.12 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.25 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 1.29 | MC |
| SRR6168973 | leaf | none (control) | 0.28 | MC |
| SRR5110431 | panicle | Dawn | 0.35 | MC |
| SRR5110432 | panicle | Dawn | 0.54 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.80 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.73 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.43 | MC |
| SRR5110446 | panicle | Dusk | 0.61 | MC |
| SRR5110447 | panicle | Dusk | 0.48 | MC |
| SRR5110448 | panicle | Dusk | 0.92 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.27 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.74 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.38 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.49 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.45 | MC |
| SRR5126147 | root | "mock,1_day" | 0.53 | MC |
| SRR5126148 | root | "mock,1_day" | 0.38 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.82 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.69 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.65 | MC |
| SRR5126155 | root | "mock,7_days" | 0.30 | MC |
| SRR5126157 | root | "mock,7_days" | 0.38 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.42 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.45 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.61 | MC |
| SRR5126165 | root | "mock,14_days" | 0.50 | MC |
| SRR5126167 | root | "mock,14_days" | 0.36 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.63 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.34 | MC |
| SRR4947481 | root | control | 0.72 | MC |
| SRR4947482 | root | Al | 0.73 | MC |
| SRR4947483 | root | Al | 0.67 | MC |
| SRR4947484 | root | Al | 0.53 | MC |
| SRR4947487 | root | control | 0.57 | MC |
| SRR4947490 | root | Al | 0.71 | MC |
| SRR4947491 | root | Al | 1.03 | MC |
| SRR4947494 | root | control | 1.05 | MC |
| SRR4947497 | root | control | 1.07 | MC |
| SRR4947498 | root | Al | 1.29 | MC |
| SRR4947499 | root | Al | 1.23 | MC |
| SRR4947501 | root | Al | 1.46 | MC |
| SRR4947502 | root | control | 1.99 | MC |
| SRR4947503 | root | control | 1.05 | MC |
| SRR4947505 | root | control | 0.78 | MC |
| SRR4947506 | root | Al | 0.53 | MC |
| SRR4947507 | root | Al | 2.24 | MC |
| SRR4947509 | root | Al | 0.59 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.43 | MC |
| SRR6502096 | root | control | 0.45 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.48 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.51 | MC |
| SRR6502106 | root | control | 0.39 | MC |
| SRR6502108 | root | control | 0.41 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.48 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.57 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.82 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.20 | MC |
| SRR2154083 | seedling | wt | 0.36 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.31 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.00 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.48 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.70 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.51 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.63 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.37 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.44 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.07 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.89 | MC |