| SRR5560728 | caryopsis | wild_type | 0.36 | MC |
| SRR4947495 | root | control | 1.62 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.84 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.43 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.13 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.80 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.67 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.06 | MC |
| SRR7265397 | embryo | 24hN | 0.60 | MC |
| SRR5856928 | leaf | control | 0.32 | MC |
| SRR5856929 | leaf | control | 0.55 | MC |
| SRR5856931 | leaf | salt | 0.19 | MC |
| SRR5856933 | leaf | control | 0.25 | MC |
| SRR5856935 | leaf | control | 0.72 | MC |
| SRR5856936 | leaf | salt | 0.70 | MC |
| SRR5856938 | leaf | salt | 0.25 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 1.47 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.64 | MC |
| SRR4947496 | root | control | 0.78 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.24 | MC |
| SRR5126147 | root | "mock,1_day" | 0.61 | MC |
| SRR5126148 | root | "mock,1_day" | 0.39 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.79 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.58 | MC |
| SRR5126153 | root | "mock,7_days" | 1.03 | MC |
| SRR5126155 | root | "mock,7_days" | 0.67 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.92 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.52 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.36 | MC |
| SRR5126165 | root | "mock,14_days" | 0.60 | MC |
| SRR5126169 | root | "mock,14_days" | 0.57 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.56 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.32 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.02 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.31 | MC |
| SRR1213694 | root | wt | 0.21 | MC |
| SRR4947478 | root | control | 2.19 | MC |
| SRR4947479 | root | control | 0.61 | MC |
| SRR4947482 | root | Al | 2.79 | MC |
| SRR4947483 | root | Al | 2.14 | MC |
| SRR4947487 | root | control | 0.85 | MC |
| SRR4947488 | root | control | 0.74 | MC |
| SRR4947490 | root | Al | 1.16 | MC |
| SRR4947491 | root | Al | 3.40 | MC |
| SRR4947492 | root | Al | 0.76 | MC |
| SRR4947494 | root | control | 0.62 | MC |
| SRR4947498 | root | Al | 2.89 | MC |
| SRR4947499 | root | Al | 1.98 | MC |
| SRR4947501 | root | Al | 0.60 | MC |
| SRR4947502 | root | control | 2.38 | MC |
| SRR4947503 | root | control | 1.13 | MC |
| SRR4947505 | root | control | 0.55 | MC |
| SRR4947506 | root | Al | 1.35 | MC |
| SRR4947507 | root | Al | 3.39 | MC |
| SRR4947508 | root | Al | 0.78 | MC |
| SRR4947509 | root | Al | 0.49 | MC |
| SRR6502096 | root | control | 0.68 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.45 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.26 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.19 | MC |
| SRR2154083 | seedling | wt | 0.88 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.55 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.36 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.13 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.92 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.00 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.73 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.30 | MC |