| SRR4457251 | 2nd_leaf | DAH4 | 0.73 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.81 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.03 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.95 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.46 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.36 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.99 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.73 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.81 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.37 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.55 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.21 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.35 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.94 | MC |
| SRR3745125 | anther | wt | 0.62 | MC |
| SRR6320498 | carpel | wt | 1.86 | MC |
| SRR5560727 | caryopsis | wild_type | 0.24 | MC |
| SRR5560728 | caryopsis | wild_type | 0.50 | MC |
| SRR5560729 | caryopsis | wild_type | 0.45 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.00 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.37 | MC |
| SRR7265393 | embryo | 12hN | 0.43 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.53 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.48 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.56 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.90 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.38 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.60 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.32 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.52 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.96 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.17 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.87 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.61 | MC |
| SRR8060835 | leaf | wild_type | 1.02 | MC |
| SRR8060836 | leaf | wild_type | 3.17 | MC |
| SRR8060837 | leaf | wild_type | 1.75 | MC |
| SRR8240820 | leaf | wild_type | 0.33 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.51 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.17 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.37 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.31 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.52 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.47 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.55 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.47 | MC |
| SRR1761529 | leaf | drought | 0.58 | MC |
| SRR6417969 | leaf | H2O_control | 0.41 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.22 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.23 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.55 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.69 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.29 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.74 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.54 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.66 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.76 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.28 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.76 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.34 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.25 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.25 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.31 | MC |
| SRR1213693 | leaf | wt | 0.26 | MC |
| SRR5856936 | leaf | salt | 0.21 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 6.09 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 7.34 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 5.20 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.38 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.18 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.06 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.41 | MC |
| SRR6168979 | leaf | none (control) | 0.45 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.50 | MC |
| SRR8582888 | panicle | AM | 1.26 | MC |
| SRR8582889 | panicle | AM | 0.32 | MC |
| SRR5110432 | panicle | Dawn | 0.50 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.39 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.38 | MC |
| SRR5110447 | panicle | Dusk | 0.60 | MC |
| SRR5110448 | panicle | Dusk | 0.84 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.35 | MC |
| SRR1213695 | root | wt | 0.18 | MC |
| SRR4947479 | root | control | 0.59 | MC |
| SRR4947483 | root | Al | 0.46 | MC |
| SRR2154082 | seedling | wt | 0.55 | MC |
| SRR2154083 | seedling | wt | 0.52 | MC |
| SRR3098742 | seedling | wt | 0.24 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.38 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.80 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.87 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.45 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.27 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.91 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.77 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 2.82 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.96 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.25 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.53 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.32 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.39 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.53 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.33 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.55 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.76 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.33 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.44 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.09 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.28 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.37 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.43 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.75 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.80 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.64 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.41 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.68 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.55 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.43 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.50 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.63 | MC |