| SRR4457250 | 2nd_leaf | DAH4 | 0.49 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.62 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.58 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.29 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.47 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.53 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.43 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.52 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.94 | MC |
| SRR5560728 | caryopsis | wild_type | 0.47 | MC |
| SRR5560729 | caryopsis | wild_type | 0.50 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.49 | MC |
| SRR7265400 | coleoptile | 2dA | 2.66 | MC |
| SRR7265401 | coleoptile | 2dA | 2.51 | MC |
| SRR7265402 | coleoptile | 2dA | 2.12 | MC |
| SRR7265403 | coleoptile | 2dN | 3.90 | MC |
| SRR7265404 | coleoptile | 2dN | 3.49 | MC |
| SRR7265405 | coleoptile | 2dN | 3.74 | MC |
| SRR7265408 | coleoptile | 3dA | 2.20 | MC |
| SRR7265412 | coleoptile | 4dA | 1.73 | MC |
| SRR7265414 | coleoptile | 4dA | 3.46 | MC |
| SRR7265415 | coleoptile | 4dN | 3.01 | MC |
| SRR7265416 | coleoptile | 4dN | 3.00 | MC |
| SRR7265417 | coleoptile | 4dN | 3.71 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.38 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.45 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.55 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.76 | MC |
| SRR7265376 | embryo | 1hA | 2.48 | MC |
| SRR7265378 | embryo | 1hA | 2.90 | MC |
| SRR7265380 | embryo | 1hN | 2.69 | MC |
| SRR7265382 | embryo | 3hA | 1.87 | MC |
| SRR7265383 | embryo | 3hA | 2.84 | MC |
| SRR7265384 | embryo | 3hA | 2.93 | MC |
| SRR7265386 | embryo | 3hN | 2.96 | MC |
| SRR7265387 | embryo | 3hN | 1.96 | MC |
| SRR7265388 | embryo | 12hA | 1.82 | MC |
| SRR7265389 | embryo | 12hA | 2.59 | MC |
| SRR7265390 | embryo | 12hA | 2.02 | MC |
| SRR7265391 | embryo | 12hN | 3.22 | MC |
| SRR7265392 | embryo | 12hN | 2.36 | MC |
| SRR7265393 | embryo | 12hN | 1.51 | MC |
| SRR7265394 | embryo | 24hA | 3.64 | MC |
| SRR7265395 | embryo | 24hA | 3.34 | MC |
| SRR7265396 | embryo | 24hA | 2.77 | MC |
| SRR7265397 | embryo | 24hN | 3.88 | MC |
| SRR7265398 | embryo | 24hN | 3.51 | MC |
| SRR7265399 | embryo | 24hN | 2.46 | MC |
| SRR2338867 | endosprem | control | 0.42 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.26 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.34 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.39 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.34 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.49 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.65 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.34 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.21 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.78 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.43 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.45 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.52 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.20 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.28 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.42 | MC |
| SRR504365 | leaf | wt | 1.14 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.26 | MC |
| SRR5856927 | leaf | control | 0.21 | MC |
| SRR5856929 | leaf | control | 0.40 | MC |
| SRR5856934 | leaf | control | 0.26 | MC |
| SRR5856936 | leaf | salt | 0.37 | MC |
| SRR5856937 | leaf | salt | 0.26 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.33 | MC |
| SRR6168979 | leaf | none (control) | 0.29 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.44 | MC |
| SRR8582889 | panicle | AM | 0.15 | MC |
| SRR8582893 | panicle | PM | 0.44 | MC |
| SRR5110431 | panicle | Dawn | 0.33 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.42 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.38 | MC |
| SRR5126148 | root | "mock,1_day" | 0.39 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.03 | MC |
| SRR5126153 | root | "mock,7_days" | 0.41 | MC |
| SRR5126155 | root | "mock,7_days" | 0.80 | MC |
| SRR5126157 | root | "mock,7_days" | 2.29 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.39 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.19 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.24 | MC |
| SRR5126165 | root | "mock,14_days" | 1.60 | MC |
| SRR5126167 | root | "mock,14_days" | 0.94 | MC |
| SRR5126169 | root | "mock,14_days" | 1.20 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.32 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.27 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.02 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.33 | MC |
| SRR2154083 | seedling | wt | 0.34 | MC |
| SRR2154087 | seedling | wt | 0.41 | MC |
| SRR3098741 | seedling | wt | 0.33 | MC |
| SRR3098743 | seedling | wt | 0.16 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.41 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.34 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.68 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.77 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 0.51 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.40 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.67 | MC |