| SRR4457265 | 2nd_leaf | DAH44 | 3.85 | MC |
| SRR3745125 | anther | wt | 4.32 | MC |
| SRR3745126 | anther | wt | 3.99 | MC |
| SRR3745127 | anther | wt | 3.53 | MC |
| SRR5560728 | caryopsis | wild_type | 3.76 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.93 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.27 | MC |
| SRR7265400 | coleoptile | 2dA | 2.76 | MC |
| SRR7265403 | coleoptile | 2dN | 2.66 | MC |
| SRR7265415 | coleoptile | 4dN | 2.27 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.74 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.52 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.85 | MC |
| SRR7265377 | embryo | 1hA | 3.18 | MC |
| SRR7265384 | embryo | 3hA | 3.74 | MC |
| SRR7265388 | embryo | 12hA | 2.51 | MC |
| SRR7265389 | embryo | 12hA | 3.44 | MC |
| SRR7265391 | embryo | 12hN | 1.45 | MC |
| SRR7265392 | embryo | 12hN | 1.12 | MC |
| SRR7265395 | embryo | 24hA | 4.70 | MC |
| SRR7265399 | embryo | 24hN | 1.54 | MC |
| SRR2338868 | endosprem | high_temperature | 1.63 | MC |
| SRR2338869 | endosprem | high_temperature | 1.21 | MC |
| SRR4457231 | flag_leaf | DAH4 | 3.34 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.66 | MC |
| SRR1213690 | flower | wt(flower buds) | 3.39 | MC |
| SRR1213691 | flower | wt | 3.59 | MC |
| SRR8060835 | leaf | wild_type | 1.32 | MC |
| SRR8240826 | leaf | wild_type | 2.29 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.88 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.83 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.71 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.17 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.73 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.35 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.29 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.07 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.72 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.72 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.21 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.62 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.26 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.99 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.63 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.96 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.31 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.68 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.74 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.15 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.11 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.09 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.31 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.85 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 4.93 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.63 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.38 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.81 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.75 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.81 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.75 | MC |
| SRR1761528 | leaf | drought | 1.81 | MC |
| SRR1761529 | leaf | drought | 3.75 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.36 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.23 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.73 | MC |
| SRR6417968 | leaf | H2O_control | 3.60 | MC |
| SRR6417969 | leaf | H2O_control | 3.26 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.41 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.38 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.46 | MC |
| SRR1213692 | leaf | wt | 2.91 | MC |
| SRR1213693 | leaf | wt | 1.02 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.86 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.61 | MC |
| SRR6502088 | leaf | control | 2.58 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.81 | MC |
| SRR5856928 | leaf | control | 1.89 | MC |
| SRR5856933 | leaf | control | 1.24 | MC |
| SRR5856935 | leaf | control | 1.87 | MC |
| SRR6168973 | leaf | none (control) | 1.17 | MC |
| SRR6168975 | leaf | none (control) | 4.07 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.71 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.35 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.58 | MC |
| SRR8582889 | panicle | AM | 0.36 | MC |
| SRR8582890 | panicle | AM | 2.33 | MC |
| SRR8582891 | panicle | PM | 3.94 | MC |
| SRR8582892 | panicle | PM | 6.98 | MC |
| SRR5110430 | panicle | Dawn | 2.17 | MC |
| SRR5110431 | panicle | Dawn | 3.53 | MC |
| SRR4947496 | root | control | 2.46 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.31 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.41 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.33 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.75 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.49 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.34 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.61 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.57 | MC |
| SRR1213695 | root | wt | 3.04 | MC |
| SRR4947478 | root | control | 0.68 | MC |
| SRR4947481 | root | control | 4.05 | MC |
| SRR4947485 | root | Al | 5.04 | MC |
| SRR4947487 | root | control | 2.94 | MC |
| SRR4947491 | root | Al | 1.05 | MC |
| SRR4947493 | root | Al | 2.60 | MC |
| SRR4947501 | root | Al | 1.51 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.38 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.49 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.80 | MC |
| SRR6441554 | seedling | wild_type | 2.49 | MC |
| SRR6441555 | seedling | wild_type | 1.85 | MC |
| SRR2154086 | seedling | wt | 3.83 | MC |
| SRR2154083 | seedling | wt | 1.97 | MC |
| SRR2154084 | seedling | wt | 2.10 | MC |
| SRR2154085 | seedling | wt | 0.50 | MC |
| SRR2154087 | seedling | wt | 1.19 | MC |
| SRR3098741 | seedling | wt | 2.71 | MC |
| SRR3098742 | seedling | wt | 1.80 | MC |
| SRR3098743 | seedling | wt | 2.08 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.38 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.58 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 4.12 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.51 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.15 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.12 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.73 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.42 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.40 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.50 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.48 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.12 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.81 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.11 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.78 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 6.17 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.71 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 2.82 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.98 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.53 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.37 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.53 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.49 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 3.48 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.79 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.75 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.78 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.33 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.56 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.33 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.38 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.90 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.04 | MC |