| SRR3745127 | anther | wt | 0.52 | MC |
| SRR6320473 | carpel | wt | 1.32 | MC |
| SRR5560727 | caryopsis | wild_type | 0.25 | MC |
| SRR5560728 | caryopsis | wild_type | 0.33 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.04 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.82 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.56 | MC |
| SRR2338866 | endosprem | control | 1.11 | MC |
| SRR2338867 | endosprem | control | 0.41 | MC |
| SRR2338868 | endosprem | high_temperature | 0.86 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.20 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.23 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.57 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.48 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.53 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.53 | MC |
| SRR8060836 | leaf | wild_type | 3.05 | MC |
| SRR8060837 | leaf | wild_type | 1.18 | MC |
| SRR8240825 | leaf | wild_type | 0.27 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.90 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.72 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.41 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.21 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.21 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.49 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.45 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.25 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.39 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.48 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.59 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.57 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.05 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.78 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.68 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.02 | MC |
| SRR1761528 | leaf | drought | 0.66 | MC |
| SRR1761529 | leaf | drought | 0.97 | MC |
| SRR1761531 | leaf | control | 1.33 | MC |
| SRR504365 | leaf | wt | 0.21 | MC |
| SRR6417969 | leaf | H2O_control | 0.54 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.36 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.54 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.33 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.07 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.93 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.65 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.35 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.31 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.65 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.66 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.79 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.51 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.34 | MC |
| SRR1213692 | leaf | wt | 0.38 | MC |
| SRR1213693 | leaf | wt | 0.60 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.51 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.64 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.63 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.70 | MC |
| SRR6502100 | leaf | control | 0.50 | MC |
| SRR6502101 | leaf | control | 0.47 | MC |
| SRR6502102 | leaf | control | 0.48 | MC |
| SRR5856931 | leaf | salt | 0.26 | MC |
| SRR5856934 | leaf | control | 0.38 | MC |
| SRR5856938 | leaf | salt | 0.65 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.65 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 1.44 | MC |
| SRR6168973 | leaf | none (control) | 0.57 | MC |
| SRR8582888 | panicle | AM | 0.61 | MC |
| SRR8582889 | panicle | AM | 1.16 | MC |
| SRR8582890 | panicle | AM | 0.47 | MC |
| SRR8582893 | panicle | PM | 0.49 | MC |
| SRR5110446 | panicle | Dusk | 0.42 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.54 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.53 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.94 | MC |
| SRR1633185 | panicle | WT | 0.44 | MC |
| SRR5126148 | root | "mock,1_day" | 0.48 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.40 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.39 | MC |
| SRR5126167 | root | "mock,14_days" | 0.31 | MC |
| SRR1213695 | root | wt | 0.63 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.31 | MC |
| SRR2154086 | seedling | wt | 0.98 | MC |
| SRR2154082 | seedling | wt | 0.90 | MC |
| SRR2154084 | seedling | wt | 0.74 | MC |
| SRR2154087 | seedling | wt | 0.35 | MC |
| SRR3098742 | seedling | wt | 0.41 | MC |
| SRR3098743 | seedling | wt | 0.22 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.72 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.30 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.00 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.11 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.19 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.75 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.92 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.97 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.23 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.68 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.60 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.39 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.70 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.57 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.30 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.18 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.02 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.41 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.55 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.87 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.30 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.28 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.74 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.61 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.80 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.69 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.57 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.16 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.85 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.58 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.36 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.65 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.32 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.16 | MC |