| SRR4457256 | 2nd_leaf | DAH20 | 2.43 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.10 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.99 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 4.34 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 3.47 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 4.45 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.26 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.35 | MC |
| SRR3745125 | anther | wt | 1.07 | MC |
| SRR3745126 | anther | wt | 0.89 | MC |
| SRR3745127 | anther | wt | 0.86 | MC |
| SRR358797 | callus | wt | 2.71 | MC |
| SRR358798 | callus | wt | 3.94 | MC |
| SRR6320473 | carpel | wt | 5.53 | MC |
| SRR6320498 | carpel | wt | 4.47 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.13 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.84 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.43 | MC |
| SRR4947495 | root | control | 0.75 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.15 | MC |
| SRR7265400 | coleoptile | 2dA | 1.22 | MC |
| SRR7265401 | coleoptile | 2dA | 1.16 | MC |
| SRR7265402 | coleoptile | 2dA | 0.73 | MC |
| SRR7265403 | coleoptile | 2dN | 1.85 | MC |
| SRR7265404 | coleoptile | 2dN | 1.26 | MC |
| SRR7265405 | coleoptile | 2dN | 0.99 | MC |
| SRR7265406 | coleoptile | 3dA | 0.85 | MC |
| SRR7265407 | coleoptile | 3dA | 1.22 | MC |
| SRR7265408 | coleoptile | 3dA | 1.09 | MC |
| SRR7265409 | coleoptile | 3dN | 2.50 | MC |
| SRR7265410 | coleoptile | 3dN | 1.70 | MC |
| SRR7265411 | coleoptile | 3dN | 1.74 | MC |
| SRR7265412 | coleoptile | 4dA | 1.00 | MC |
| SRR7265413 | coleoptile | 4dA | 1.20 | MC |
| SRR7265414 | coleoptile | 4dA | 1.52 | MC |
| SRR7265415 | coleoptile | 4dN | 2.27 | MC |
| SRR7265416 | coleoptile | 4dN | 1.35 | MC |
| SRR7265417 | coleoptile | 4dN | 2.08 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.45 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.53 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.76 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.12 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.99 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.82 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.89 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.78 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.30 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.81 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.21 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.76 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.77 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.02 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.50 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.49 | MC |
| SRR7265376 | embryo | 1hA | 1.82 | MC |
| SRR7265377 | embryo | 1hA | 1.18 | MC |
| SRR7265378 | embryo | 1hA | 1.13 | MC |
| SRR7265379 | embryo | 1hN | 1.47 | MC |
| SRR7265381 | embryo | 1hN | 1.41 | MC |
| SRR7265382 | embryo | 3hA | 0.64 | MC |
| SRR7265383 | embryo | 3hA | 0.59 | MC |
| SRR7265384 | embryo | 3hA | 0.95 | MC |
| SRR7265385 | embryo | 3hN | 0.88 | MC |
| SRR7265386 | embryo | 3hN | 1.08 | MC |
| SRR7265387 | embryo | 3hN | 1.22 | MC |
| SRR7265388 | embryo | 12hA | 1.02 | MC |
| SRR7265389 | embryo | 12hA | 1.78 | MC |
| SRR7265390 | embryo | 12hA | 1.22 | MC |
| SRR7265391 | embryo | 12hN | 1.93 | MC |
| SRR7265392 | embryo | 12hN | 0.90 | MC |
| SRR7265393 | embryo | 12hN | 1.17 | MC |
| SRR7265394 | embryo | 24hA | 1.46 | MC |
| SRR7265395 | embryo | 24hA | 1.11 | MC |
| SRR7265396 | embryo | 24hA | 1.09 | MC |
| SRR7265397 | embryo | 24hN | 1.10 | MC |
| SRR7265398 | embryo | 24hN | 1.02 | MC |
| SRR7265399 | embryo | 24hN | 1.68 | MC |
| SRR976168 | flag_leaf | wild_type | 0.85 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.65 | MC |
| SRR4457236 | flag_leaf | DAH12 | 3.32 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.30 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.25 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.02 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.36 | MC |
| SRR4457243 | flag_leaf | DAH36 | 3.72 | MC |
| SRR4457244 | flag_leaf | DAH36 | 3.34 | MC |
| SRR4457245 | flag_leaf | DAH36 | 3.76 | MC |
| SRR4457246 | flag_leaf | DAH44 | 4.08 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.80 | MC |
| SRR4457248 | flag_leaf | DAH44 | 4.40 | MC |
| SRR8060835 | leaf | wild_type | 1.97 | MC |
| SRR8060837 | leaf | wild_type | 2.45 | MC |
| SRR8240824 | leaf | wild_type | 0.27 | MC |
| SRR8240825 | leaf | wild_type | 0.32 | MC |
| SRR8240826 | leaf | wild_type | 0.33 | MC |
| SRR8240818 | leaf | wild_type | 0.26 | MC |
| SRR8240819 | leaf | wild_type | 0.38 | MC |
| SRR8240820 | leaf | wild_type | 0.52 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.07 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.24 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.20 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.06 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.08 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 4.74 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.71 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.94 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.94 | MC |
| SRR1761529 | leaf | drought | 3.94 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.75 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.59 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.55 | MC |
| SRR6417967 | leaf | H2O_control | 1.38 | MC |
| SRR6417968 | leaf | H2O_control | 1.37 | MC |
| SRR6417969 | leaf | H2O_control | 1.87 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.86 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.47 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.77 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.31 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.82 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.00 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.97 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.46 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.12 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.46 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 4.36 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.88 | MC |
| SRR6502088 | leaf | control | 2.19 | MC |
| SRR6502089 | leaf | control | 1.76 | MC |
| SRR6502090 | leaf | control | 1.23 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 4.39 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 4.87 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 3.15 | MC |
| SRR6502100 | leaf | control | 1.51 | MC |
| SRR6502101 | leaf | control | 1.39 | MC |
| SRR6502102 | leaf | control | 1.64 | MC |
| SRR5856927 | leaf | control | 0.25 | MC |
| SRR5856928 | leaf | control | 0.88 | MC |
| SRR5856929 | leaf | control | 0.37 | MC |
| SRR5856930 | leaf | salt | 1.77 | MC |
| SRR5856932 | leaf | salt | 1.62 | MC |
| SRR5856933 | leaf | control | 0.62 | MC |
| SRR5856934 | leaf | control | 0.29 | MC |
| SRR5856935 | leaf | control | 1.81 | MC |
| SRR5856937 | leaf | salt | 1.59 | MC |
| SRR5856938 | leaf | salt | 1.57 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 4.70 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 6.90 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.62 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 4.55 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.31 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.24 | MC |
| SRR6168973 | leaf | none (control) | 2.80 | MC |
| SRR6168974 | leaf | none (control) | 3.00 | MC |
| SRR6168975 | leaf | none (control) | 2.15 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.24 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.28 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.99 | MC |
| SRR6168980 | leaf | none (control) | 0.78 | MC |
| SRR6168981 | leaf | none (control) | 2.44 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.32 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.43 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.99 | MC |
| SRR5110432 | panicle | Dawn | 2.01 | MC |
| SRR4947496 | root | control | 1.43 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 3.94 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 2.80 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.31 | MC |
| SRR5110438 | panicle | Dawn + 7h | 3.12 | MC |
| SRR5110439 | panicle | Dawn + 7h | 4.39 | MC |
| SRR5110440 | panicle | Dawn + 7h | 4.64 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 4.02 | MC |
| SRR5110447 | panicle | Dusk | 3.88 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.06 | MC |
| SRR5110452 | panicle | Dawn + 14h | 5.53 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 2.36 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.04 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.82 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 4.24 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 5.89 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 4.15 | MC |
| SRR5126147 | root | "mock,1_day" | 2.48 | MC |
| SRR5126148 | root | "mock,1_day" | 1.59 | MC |
| SRR5126149 | root | "mock,1_day" | 2.41 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.37 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.48 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.31 | MC |
| SRR5126155 | root | "mock,7_days" | 4.26 | MC |
| SRR5126165 | root | "mock,14_days" | 3.27 | MC |
| SRR5126167 | root | "mock,14_days" | 3.84 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.87 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 4.75 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.98 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.39 | MC |
| SRR4947479 | root | control | 0.46 | MC |
| SRR4947480 | root | control | 0.90 | MC |
| SRR4947481 | root | control | 2.57 | MC |
| SRR4947482 | root | Al | 1.20 | MC |
| SRR4947483 | root | Al | 0.46 | MC |
| SRR4947484 | root | Al | 1.09 | MC |
| SRR4947485 | root | Al | 1.34 | MC |
| SRR4947488 | root | control | 0.89 | MC |
| SRR4947489 | root | control | 0.95 | MC |
| SRR4947491 | root | Al | 0.85 | MC |
| SRR4947497 | root | control | 2.31 | MC |
| SRR4947498 | root | Al | 1.10 | MC |
| SRR4947501 | root | Al | 1.13 | MC |
| SRR4947504 | root | control | 1.09 | MC |
| SRR4947505 | root | control | 1.66 | MC |
| SRR4947506 | root | Al | 0.55 | MC |
| SRR4947507 | root | Al | 1.42 | MC |
| SRR4947509 | root | Al | 1.16 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.94 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.58 | MC |
| SRR6502093 | root | 100 mM NaCl | 2.67 | MC |
| SRR6502094 | root | control | 0.83 | MC |
| SRR6502095 | root | control | 1.23 | MC |
| SRR6502096 | root | control | 0.67 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.32 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.09 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.46 | MC |
| SRR6502106 | root | control | 1.20 | MC |
| SRR6502107 | root | control | 1.22 | MC |
| SRR6502108 | root | control | 1.50 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.56 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.92 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.58 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.91 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.55 | MC |
| SRR2154082 | seedling | wt | 1.92 | MC |
| SRR2154083 | seedling | wt | 3.00 | MC |
| SRR2154084 | seedling | wt | 3.23 | MC |
| SRR2154085 | seedling | wt | 4.10 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.72 | MC |
| SRR1944583 | seedling | no_treatment | 3.03 | MC |
| SRR358791 | seedling | wt | 4.24 | MC |
| SRR358793 | seedling | wt | 1.24 | MC |
| SRR358794 | seedling | wt | 2.14 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.91 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.92 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.14 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.06 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.27 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.13 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.20 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.10 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.30 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.65 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.06 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.48 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 3.13 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.79 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.64 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.37 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.51 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.97 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.98 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.05 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.20 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.15 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.66 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.45 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.90 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.45 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.48 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.90 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 3.78 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 3.55 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.70 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.28 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 2.96 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.83 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.19 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.66 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 2.11 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.39 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.39 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 3.98 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 3.66 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 2.37 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.47 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.47 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 0.99 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.99 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 4.08 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.90 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.65 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.74 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.82 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.90 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.94 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 2.67 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.53 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 4.34 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.10 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.55 | MC |