| SRR4457249 | 2nd_leaf | DAH4 | 5.10 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.63 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.26 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.52 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.07 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.04 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.37 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.66 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.05 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.27 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.45 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.67 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.18 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.38 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.82 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.92 | MC |
| SRR6320473 | carpel | wt | 2.69 | MC |
| SRR6320498 | carpel | wt | 1.32 | MC |
| SRR5560729 | caryopsis | wild_type | 4.56 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.01 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.52 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.11 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.84 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.23 | MC |
| SRR7265380 | embryo | 1hN | 3.69 | MC |
| SRR7265384 | embryo | 3hA | 4.06 | MC |
| SRR7265385 | embryo | 3hN | 3.61 | MC |
| SRR7265387 | embryo | 3hN | 3.13 | MC |
| SRR2338867 | endosprem | control | 0.63 | MC |
| SRR2338868 | endosprem | high_temperature | 0.90 | MC |
| SRR2338869 | endosprem | high_temperature | 1.18 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.81 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.37 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.23 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.77 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.33 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.65 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.39 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.47 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.87 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.22 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.63 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.60 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.64 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.57 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.10 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.07 | MC |
| SRR8240819 | leaf | wild_type | 0.73 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.68 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.08 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.15 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.04 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.42 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.73 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.51 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.74 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.49 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.08 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.98 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.77 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.39 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.46 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.56 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.61 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.67 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.11 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.56 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.50 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.69 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.52 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.28 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.17 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.10 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.24 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 2.00 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.84 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.60 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.07 | MC |
| SRR6417967 | leaf | H2O_control | 1.76 | MC |
| SRR6417968 | leaf | H2O_control | 2.33 | MC |
| SRR6417969 | leaf | H2O_control | 3.01 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.30 | MC |
| SRR6168974 | leaf | none (control) | 2.51 | MC |
| SRR6168975 | leaf | none (control) | 1.43 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.84 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.04 | MC |
| SRR6168979 | leaf | none (control) | 1.03 | MC |
| SRR6168981 | leaf | none (control) | 1.25 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.09 | MC |
| SRR8582888 | panicle | AM | 1.32 | MC |
| SRR8582889 | panicle | AM | 0.64 | MC |
| SRR8582890 | panicle | AM | 0.66 | MC |
| SRR8582891 | panicle | PM | 1.59 | MC |
| SRR8582892 | panicle | PM | 3.88 | MC |
| SRR5110432 | panicle | Dawn | 3.67 | MC |
| SRR4947496 | root | control | 2.14 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 4.24 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 4.34 | MC |
| SRR5110438 | panicle | Dawn + 7h | 4.00 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 4.95 | MC |
| SRR5110445 | panicle | Dusk | 4.57 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.24 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.56 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.48 | MC |
| SRR5110459 | panicle | Dawn + 21h | 4.39 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.75 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.84 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.02 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.08 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 3.70 | MC |
| SRR5126153 | root | "mock,7_days" | 3.69 | MC |
| SRR5126157 | root | "mock,7_days" | 2.58 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.80 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 3.95 | MC |
| SRR5126165 | root | "mock,14_days" | 3.65 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.70 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 3.67 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.84 | MC |
| SRR1213694 | root | wt | 2.85 | MC |
| SRR4947478 | root | control | 4.18 | MC |
| SRR4947479 | root | control | 2.72 | MC |
| SRR4947480 | root | control | 5.13 | MC |
| SRR4947481 | root | control | 2.19 | MC |
| SRR4947483 | root | Al | 3.80 | MC |
| SRR4947484 | root | Al | 2.84 | MC |
| SRR4947485 | root | Al | 2.56 | MC |
| SRR4947487 | root | control | 3.79 | MC |
| SRR4947488 | root | control | 2.51 | MC |
| SRR4947489 | root | control | 2.22 | MC |
| SRR4947490 | root | Al | 4.03 | MC |
| SRR4947491 | root | Al | 4.93 | MC |
| SRR4947492 | root | Al | 3.38 | MC |
| SRR4947493 | root | Al | 1.38 | MC |
| SRR4947494 | root | control | 3.82 | MC |
| SRR4947497 | root | control | 4.33 | MC |
| SRR4947498 | root | Al | 4.17 | MC |
| SRR4947499 | root | Al | 4.85 | MC |
| SRR4947500 | root | Al | 3.15 | MC |
| SRR4947501 | root | Al | 5.32 | MC |
| SRR4947502 | root | control | 4.87 | MC |
| SRR4947503 | root | control | 3.25 | MC |
| SRR4947504 | root | control | 2.09 | MC |
| SRR4947505 | root | control | 2.25 | MC |
| SRR4947506 | root | Al | 3.00 | MC |
| SRR4947508 | root | Al | 2.06 | MC |
| SRR6441554 | seedling | wild_type | 0.66 | MC |
| SRR6441555 | seedling | wild_type | 1.45 | MC |
| SRR2154086 | seedling | wt | 2.39 | MC |
| SRR2154082 | seedling | wt | 2.10 | MC |
| SRR2154083 | seedling | wt | 3.41 | MC |
| SRR2154084 | seedling | wt | 3.37 | MC |
| SRR2154085 | seedling | wt | 2.78 | MC |
| SRR2154087 | seedling | wt | 3.03 | MC |
| SRR3098741 | seedling | wt | 0.52 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.95 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.38 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.28 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.97 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.35 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.00 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.72 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.28 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.26 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.80 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.70 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.73 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.97 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.48 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.01 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.39 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.28 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.77 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 4.67 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 3.02 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 5.35 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 3.53 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 5.15 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 6.47 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.65 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.40 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.62 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 3.10 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.79 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 2.97 | MC |