| SRR6320473 | carpel | wt | 2.62 | MC |
| SRR6320498 | carpel | wt | 3.49 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.89 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.47 | MC |
| SRR7265400 | coleoptile | 2dA | 2.39 | MC |
| SRR7265401 | coleoptile | 2dA | 1.17 | MC |
| SRR7265402 | coleoptile | 2dA | 2.04 | MC |
| SRR7265406 | coleoptile | 3dA | 0.38 | MC |
| SRR7265407 | coleoptile | 3dA | 0.30 | MC |
| SRR7265408 | coleoptile | 3dA | 0.32 | MC |
| SRR7265413 | coleoptile | 4dA | 1.60 | MC |
| SRR7265414 | coleoptile | 4dA | 0.55 | MC |
| SRR7265416 | coleoptile | 4dN | 3.46 | MC |
| SRR7265417 | coleoptile | 4dN | 4.02 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.71 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.60 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.68 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.71 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.62 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.71 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.93 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 3.48 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.72 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.95 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.27 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.50 | MC |
| SRR7265376 | embryo | 1hA | 0.70 | MC |
| SRR7265377 | embryo | 1hA | 1.92 | MC |
| SRR7265378 | embryo | 1hA | 0.95 | MC |
| SRR7265379 | embryo | 1hN | 0.61 | MC |
| SRR7265380 | embryo | 1hN | 0.94 | MC |
| SRR7265381 | embryo | 1hN | 0.92 | MC |
| SRR7265385 | embryo | 3hN | 2.04 | MC |
| SRR7265386 | embryo | 3hN | 1.35 | MC |
| SRR7265387 | embryo | 3hN | 2.23 | MC |
| SRR7265388 | embryo | 12hA | 4.32 | MC |
| SRR7265394 | embryo | 24hA | 3.44 | MC |
| SRR7265395 | embryo | 24hA | 4.05 | MC |
| SRR7265396 | embryo | 24hA | 3.11 | MC |
| SRR2338867 | endosprem | control | 0.46 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.56 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.51 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.27 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.88 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.73 | MC |
| SRR5856927 | leaf | control | 1.12 | MC |
| SRR5856928 | leaf | control | 0.84 | MC |
| SRR5856929 | leaf | control | 1.31 | MC |
| SRR5856930 | leaf | salt | 0.67 | MC |
| SRR5856931 | leaf | salt | 0.65 | MC |
| SRR5856932 | leaf | salt | 0.25 | MC |
| SRR5856933 | leaf | control | 1.57 | MC |
| SRR5856934 | leaf | control | 1.30 | MC |
| SRR5856935 | leaf | control | 0.90 | MC |
| SRR5856936 | leaf | salt | 0.55 | MC |
| SRR5856937 | leaf | salt | 0.67 | MC |
| SRR5856938 | leaf | salt | 0.40 | MC |
| SRR6168973 | leaf | none (control) | 0.59 | MC |
| SRR6168974 | leaf | none (control) | 0.74 | MC |
| SRR6168975 | leaf | none (control) | 0.58 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.07 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.86 | MC |
| SRR6168981 | leaf | none (control) | 0.81 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.33 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.44 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.87 | MC |
| SRR5110431 | panicle | Dawn | 0.65 | MC |
| SRR5110432 | panicle | Dawn | 0.51 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.44 | MC |
| SRR5110445 | panicle | Dusk | 0.43 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.50 | MC |
| SRR1633182 | panicle | WT | 1.47 | MC |
| SRR1633185 | panicle | WT | 0.82 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.48 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 3.99 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.15 | MC |
| SRR5126147 | root | "mock,1_day" | 0.33 | MC |
| SRR5126148 | root | "mock,1_day" | 0.61 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.87 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.01 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.17 | MC |
| SRR5126153 | root | "mock,7_days" | 0.65 | MC |
| SRR5126155 | root | "mock,7_days" | 1.16 | MC |
| SRR5126157 | root | "mock,7_days" | 0.71 | MC |
| SRR5126165 | root | "mock,14_days" | 0.78 | MC |
| SRR5126167 | root | "mock,14_days" | 1.20 | MC |
| SRR5126169 | root | "mock,14_days" | 0.96 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.50 | MC |
| SRR1213694 | root | wt | 0.42 | MC |
| SRR4947479 | root | control | 0.46 | MC |
| SRR4947481 | root | control | 1.13 | MC |
| SRR4947483 | root | Al | 0.75 | MC |
| SRR4947485 | root | Al | 0.77 | MC |
| SRR4947487 | root | control | 0.77 | MC |
| SRR4947489 | root | control | 0.77 | MC |
| SRR4947491 | root | Al | 0.63 | MC |
| SRR4947492 | root | Al | 1.21 | MC |
| SRR4947493 | root | Al | 0.90 | MC |
| SRR4947497 | root | control | 1.38 | MC |
| SRR4947498 | root | Al | 0.82 | MC |
| SRR4947499 | root | Al | 0.84 | MC |
| SRR4947500 | root | Al | 1.27 | MC |
| SRR4947501 | root | Al | 1.20 | MC |
| SRR4947502 | root | control | 0.53 | MC |
| SRR4947504 | root | control | 1.32 | MC |
| SRR4947505 | root | control | 1.35 | MC |
| SRR4947506 | root | Al | 0.40 | MC |
| SRR4947507 | root | Al | 0.69 | MC |
| SRR4947508 | root | Al | 0.56 | MC |
| SRR4947509 | root | Al | 1.05 | MC |
| SRR6502092 | root | 100 mM NaCl | 3.62 | MC |
| SRR6502094 | root | control | 5.09 | MC |
| SRR6502096 | root | control | 2.85 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.77 | MC |
| SRR6502104 | root | 100 mM NaCl | 2.05 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.05 | MC |
| SRR6502106 | root | control | 3.37 | MC |
| SRR6502107 | root | control | 3.86 | MC |
| SRR6502108 | root | control | 1.14 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.43 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.21 | MC |
| SRR2154082 | seedling | wt | 0.36 | MC |
| SRR2154083 | seedling | wt | 0.33 | MC |
| SRR2154084 | seedling | wt | 0.66 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.10 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.93 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.98 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.50 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.30 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.13 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.15 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 1.27 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 5.27 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 5.07 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 7.03 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.44 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 2.59 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.85 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 2.89 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.75 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 3.04 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 2.76 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 2.55 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.90 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 3.49 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 2.49 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 4.95 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 4.12 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 3.43 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 4.53 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 6.85 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 6.89 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.20 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 7.99 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.84 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.70 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.40 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 2.26 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.61 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.44 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.12 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.82 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.85 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.85 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.59 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.18 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.47 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.49 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.05 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.84 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.55 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.33 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.57 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.47 | MC |