| SRR4457250 | 2nd_leaf | DAH4 | 0.45 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.31 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 3.29 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.47 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 4.13 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.62 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.73 | MC |
| SRR5560727 | caryopsis | wild_type | 0.38 | MC |
| SRR7265400 | coleoptile | 2dA | 0.68 | MC |
| SRR7265402 | coleoptile | 2dA | 1.19 | MC |
| SRR7265404 | coleoptile | 2dN | 1.52 | MC |
| SRR7265405 | coleoptile | 2dN | 2.01 | MC |
| SRR7265408 | coleoptile | 3dA | 2.46 | MC |
| SRR7265410 | coleoptile | 3dN | 2.34 | MC |
| SRR7265411 | coleoptile | 3dN | 1.55 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.46 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.35 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.15 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.67 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.73 | MC |
| SRR7265376 | embryo | 1hA | 2.30 | MC |
| SRR7265377 | embryo | 1hA | 1.22 | MC |
| SRR7265379 | embryo | 1hN | 0.42 | MC |
| SRR7265381 | embryo | 1hN | 1.78 | MC |
| SRR7265382 | embryo | 3hA | 1.25 | MC |
| SRR7265384 | embryo | 3hA | 1.72 | MC |
| SRR7265385 | embryo | 3hN | 1.70 | MC |
| SRR7265386 | embryo | 3hN | 0.85 | MC |
| SRR7265387 | embryo | 3hN | 0.70 | MC |
| SRR7265391 | embryo | 12hN | 1.71 | MC |
| SRR7265392 | embryo | 12hN | 1.77 | MC |
| SRR7265393 | embryo | 12hN | 2.80 | MC |
| SRR7265395 | embryo | 24hA | 1.53 | MC |
| SRR7265396 | embryo | 24hA | 1.68 | MC |
| SRR7265399 | embryo | 24hN | 1.67 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.89 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.51 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.01 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.41 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.92 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.94 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.54 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.03 | MC |
| SRR8240825 | leaf | wild_type | 0.28 | MC |
| SRR8240820 | leaf | wild_type | 0.64 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.47 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.10 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.56 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.57 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.52 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.86 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.17 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.69 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.49 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.52 | MC |
| SRR504365 | leaf | wt | 0.64 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.17 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.54 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.28 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.28 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.25 | MC |
| SRR1213693 | leaf | wt | 0.22 | MC |
| SRR6502090 | leaf | control | 1.05 | MC |
| SRR5856933 | leaf | control | 0.26 | MC |
| SRR6168980 | leaf | none (control) | 0.77 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.34 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.89 | MC |
| SRR8582888 | panicle | AM | 1.10 | MC |
| SRR8582889 | panicle | AM | 0.29 | MC |
| SRR8582891 | panicle | PM | 3.12 | MC |
| SRR8582893 | panicle | PM | 3.16 | MC |
| SRR5110429 | panicle | Dawn | 0.50 | MC |
| SRR5110437 | panicle | Dawn + 7h | 1.05 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.96 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 3.23 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.80 | MC |
| SRR5126165 | root | "mock,14_days" | 3.26 | MC |
| SRR5126169 | root | "mock,14_days" | 1.39 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.06 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.14 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.30 | MC |
| SRR4947497 | root | control | 3.51 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.96 | MC |
| SRR2154086 | seedling | wt | 4.10 | MC |
| SRR2154083 | seedling | wt | 0.94 | MC |
| SRR2154087 | seedling | wt | 1.60 | MC |
| SRR3098742 | seedling | wt | 2.20 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.73 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 3.14 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.02 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.48 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.94 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.62 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.40 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.06 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.34 | MC |