| SRR3745125 | anther | wt | 3.10 | MC |
| SRR358795 | callus | wt | 4.26 | MC |
| SRR358796 | callus | wt | 3.50 | MC |
| SRR358797 | callus | wt | 4.77 | MC |
| SRR358798 | callus | wt | 4.41 | MC |
| SRR4947495 | root | control | 1.04 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.93 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.80 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 2.32 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.14 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.73 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.52 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.79 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.30 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.15 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.16 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.84 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.85 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.94 | MC |
| SRR4947496 | root | control | 0.51 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.49 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.77 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.40 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.45 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.72 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.55 | MC |
| SRR5126147 | root | "mock,1_day" | 3.90 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.72 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.73 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.19 | MC |
| SRR5126157 | root | "mock,7_days" | 4.68 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.57 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.49 | MC |
| SRR1213694 | root | wt | 1.64 | MC |
| SRR4947478 | root | control | 0.73 | MC |
| SRR4947479 | root | control | 0.45 | MC |
| SRR4947481 | root | control | 0.58 | MC |
| SRR4947482 | root | Al | 1.34 | MC |
| SRR4947483 | root | Al | 0.55 | MC |
| SRR4947484 | root | Al | 1.51 | MC |
| SRR4947485 | root | Al | 0.62 | MC |
| SRR4947487 | root | control | 0.45 | MC |
| SRR4947490 | root | Al | 0.87 | MC |
| SRR4947491 | root | Al | 0.81 | MC |
| SRR4947493 | root | Al | 0.85 | MC |
| SRR4947494 | root | control | 1.82 | MC |
| SRR4947497 | root | control | 2.24 | MC |
| SRR4947498 | root | Al | 0.85 | MC |
| SRR4947499 | root | Al | 0.84 | MC |
| SRR4947500 | root | Al | 1.13 | MC |
| SRR4947501 | root | Al | 1.04 | MC |
| SRR4947502 | root | control | 2.84 | MC |
| SRR4947503 | root | control | 0.65 | MC |
| SRR4947506 | root | Al | 0.57 | MC |
| SRR4947507 | root | Al | 1.40 | MC |
| SRR4947508 | root | Al | 0.63 | MC |
| SRR4947509 | root | Al | 0.61 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.84 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.71 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.73 | MC |
| SRR6502094 | root | control | 0.97 | MC |
| SRR6502095 | root | control | 0.94 | MC |
| SRR6502096 | root | control | 0.51 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.14 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.21 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.53 | MC |
| SRR6502106 | root | control | 1.98 | MC |
| SRR6502108 | root | control | 0.69 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.34 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.28 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.55 | MC |
| SRR1740431 | root_elongation_zone | wt | 0.92 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.29 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.15 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.44 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.89 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.31 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.65 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.65 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 8.17 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 3.46 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 8.04 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 9.38 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 3.38 | MC |