| SRR4457249 | 2nd_leaf | DAH4 | 1.81 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.78 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.32 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.39 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.61 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.32 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.74 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.24 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.55 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.03 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.40 | MC |
| SRR3745127 | anther | wt | 0.53 | MC |
| SRR5560727 | caryopsis | wild_type | 0.93 | MC |
| SRR5560728 | caryopsis | wild_type | 0.41 | MC |
| SRR5560729 | caryopsis | wild_type | 0.47 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.41 | MC |
| SRR7265403 | coleoptile | 2dN | 0.41 | MC |
| SRR7265405 | coleoptile | 2dN | 0.36 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.39 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.76 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.49 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.67 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.26 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.67 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.74 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.80 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.42 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.58 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.86 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.35 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.50 | MC |
| SRR7265376 | embryo | 1hA | 0.65 | MC |
| SRR7265379 | embryo | 1hN | 0.46 | MC |
| SRR7265380 | embryo | 1hN | 0.53 | MC |
| SRR7265381 | embryo | 1hN | 0.37 | MC |
| SRR7265382 | embryo | 3hA | 0.42 | MC |
| SRR7265383 | embryo | 3hA | 0.58 | MC |
| SRR7265384 | embryo | 3hA | 0.37 | MC |
| SRR7265386 | embryo | 3hN | 0.26 | MC |
| SRR7265387 | embryo | 3hN | 0.25 | MC |
| SRR7265391 | embryo | 12hN | 0.54 | MC |
| SRR2338868 | endosprem | high_temperature | 0.61 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.22 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.50 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.66 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.40 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.46 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.50 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.29 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.39 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.58 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.71 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.48 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.51 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.96 | MC |
| SRR1213691 | flower | wt | 0.82 | MC |
| SRR8060835 | leaf | wild_type | 2.00 | MC |
| SRR8060836 | leaf | wild_type | 1.44 | MC |
| SRR8060837 | leaf | wild_type | 1.88 | MC |
| SRR8240824 | leaf | wild_type | 1.46 | MC |
| SRR8240825 | leaf | wild_type | 0.80 | MC |
| SRR8240826 | leaf | wild_type | 0.96 | MC |
| SRR8240819 | leaf | wild_type | 0.84 | MC |
| SRR8240820 | leaf | wild_type | 0.33 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.36 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.40 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.76 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.36 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.40 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.51 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.34 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.49 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.39 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.23 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.52 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.44 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.01 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.92 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.08 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.53 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 1.55 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.56 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.53 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 1.55 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.56 | MC |
| SRR1761528 | leaf | drought | 0.53 | MC |
| SRR1761530 | leaf | control | 1.55 | MC |
| SRR1761531 | leaf | control | 0.56 | MC |
| SRR504365 | leaf | wt | 0.72 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.61 | MC |
| SRR6417967 | leaf | H2O_control | 1.03 | MC |
| SRR6417968 | leaf | H2O_control | 0.43 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.90 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.71 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.31 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.91 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.66 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.81 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.32 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.35 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.48 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.21 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.26 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.33 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.36 | MC |
| SRR1213692 | leaf | wt | 0.51 | MC |
| SRR1213693 | leaf | wt | 0.39 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.41 | MC |
| SRR6502089 | leaf | control | 0.38 | MC |
| SRR6502090 | leaf | control | 0.38 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.45 | MC |
| SRR6502100 | leaf | control | 0.87 | MC |
| SRR6502101 | leaf | control | 0.53 | MC |
| SRR6502102 | leaf | control | 0.44 | MC |
| SRR6168973 | leaf | none (control) | 0.30 | MC |
| SRR6168979 | leaf | none (control) | 0.53 | MC |
| SRR5110429 | panicle | Dawn | 1.11 | MC |
| SRR5110430 | panicle | Dawn | 1.05 | MC |
| SRR5110431 | panicle | Dawn | 0.63 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.53 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.02 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.29 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.18 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.92 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.55 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.66 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.57 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.20 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.00 | MC |
| SRR5110445 | panicle | Dusk | 0.57 | MC |
| SRR5110446 | panicle | Dusk | 1.23 | MC |
| SRR5110447 | panicle | Dusk | 1.70 | MC |
| SRR5110448 | panicle | Dusk | 1.85 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.81 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.83 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.44 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.88 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.91 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.78 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.32 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.34 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.49 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.40 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.86 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.93 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.33 | MC |
| SRR1213694 | root | wt | 1.00 | MC |
| SRR1213695 | root | wt | 0.24 | MC |
| SRR4947482 | root | Al | 0.38 | MC |
| SRR4947483 | root | Al | 0.41 | MC |
| SRR4947506 | root | Al | 0.74 | MC |
| SRR6441554 | seedling | wild_type | 0.23 | MC |
| SRR6441555 | seedling | wild_type | 0.26 | MC |
| SRR2154083 | seedling | wt | 0.31 | MC |
| SRR3098741 | seedling | wt | 0.29 | MC |
| SRR3098742 | seedling | wt | 0.20 | MC |
| SRR3098743 | seedling | wt | 0.33 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.57 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.81 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.40 | MC |
| SRR1944583 | seedling | no_treatment | 1.09 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.60 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.32 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.19 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.20 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.21 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.16 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.41 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.53 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.27 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.16 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.44 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.37 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.83 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.31 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.92 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.98 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.74 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.34 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.03 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.64 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.35 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.86 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.23 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.71 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.28 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.23 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.00 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 3.31 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.80 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.61 | MC |