| SRR4457254 | 2nd_leaf | DAH12 | 0.38 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.76 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.52 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.20 | MC |
| SRR5560728 | caryopsis | wild_type | 0.85 | MC |
| SRR5560729 | caryopsis | wild_type | 0.64 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.76 | MC |
| SRR4947495 | root | control | 0.68 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.74 | MC |
| SRR7265403 | coleoptile | 2dN | 1.02 | MC |
| SRR7265406 | coleoptile | 3dA | 0.82 | MC |
| SRR7265407 | coleoptile | 3dA | 0.82 | MC |
| SRR7265409 | coleoptile | 3dN | 0.66 | MC |
| SRR7265410 | coleoptile | 3dN | 1.24 | MC |
| SRR7265413 | coleoptile | 4dA | 1.44 | MC |
| SRR7265417 | coleoptile | 4dN | 0.43 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.60 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.78 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.86 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.02 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.48 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.47 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.40 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.51 | MC |
| SRR7265377 | embryo | 1hA | 0.47 | MC |
| SRR7265378 | embryo | 1hA | 0.64 | MC |
| SRR7265381 | embryo | 1hN | 0.58 | MC |
| SRR7265382 | embryo | 3hA | 1.22 | MC |
| SRR7265384 | embryo | 3hA | 1.15 | MC |
| SRR7265386 | embryo | 3hN | 0.54 | MC |
| SRR7265387 | embryo | 3hN | 0.29 | MC |
| SRR7265388 | embryo | 12hA | 0.67 | MC |
| SRR7265389 | embryo | 12hA | 0.90 | MC |
| SRR7265390 | embryo | 12hA | 0.78 | MC |
| SRR7265391 | embryo | 12hN | 1.16 | MC |
| SRR7265392 | embryo | 12hN | 1.18 | MC |
| SRR7265393 | embryo | 12hN | 0.77 | MC |
| SRR7265394 | embryo | 24hA | 1.21 | MC |
| SRR7265398 | embryo | 24hN | 0.53 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.23 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.54 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.52 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.38 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.33 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.93 | MC |
| SRR4457248 | flag_leaf | DAH44 | 4.15 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.34 | MC |
| SRR8060836 | leaf | wild_type | 2.47 | MC |
| SRR8240824 | leaf | wild_type | 0.72 | MC |
| SRR8240825 | leaf | wild_type | 0.71 | MC |
| SRR8240826 | leaf | wild_type | 0.79 | MC |
| SRR8240818 | leaf | wild_type | 0.74 | MC |
| SRR8240820 | leaf | wild_type | 0.27 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.76 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.22 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.41 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.05 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.04 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.08 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.83 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.49 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.74 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.68 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.06 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 5.56 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.64 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.58 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.09 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.02 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.84 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.07 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.80 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.87 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.85 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.60 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.72 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.72 | MC |
| SRR1761528 | leaf | drought | 4.72 | MC |
| SRR504365 | leaf | wt | 3.69 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.66 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.97 | MC |
| SRR6417969 | leaf | H2O_control | 1.43 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.03 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.27 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.67 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.98 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.37 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.24 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.29 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.76 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.59 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.38 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.63 | MC |
| SRR6502088 | leaf | control | 3.15 | MC |
| SRR6502090 | leaf | control | 2.10 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 4.90 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 4.45 | MC |
| SRR6502100 | leaf | control | 3.47 | MC |
| SRR6502101 | leaf | control | 0.59 | MC |
| SRR5856928 | leaf | control | 0.25 | MC |
| SRR5856931 | leaf | salt | 0.66 | MC |
| SRR5856933 | leaf | control | 0.37 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 5.12 | MC |
| SRR6168973 | leaf | none (control) | 0.39 | MC |
| SRR6168974 | leaf | none (control) | 0.31 | MC |
| SRR6168975 | leaf | none (control) | 1.44 | MC |
| SRR6168980 | leaf | none (control) | 0.36 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.29 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.48 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.51 | MC |
| SRR8582888 | panicle | AM | 1.80 | MC |
| SRR8582889 | panicle | AM | 0.12 | MC |
| SRR8582890 | panicle | AM | 1.92 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.82 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.72 | MC |
| SRR5110446 | panicle | Dusk | 2.69 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.08 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.34 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.78 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.60 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.19 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.71 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.59 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.37 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.44 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.40 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.64 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.52 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.70 | MC |
| SRR5126167 | root | "mock,14_days" | 0.35 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.98 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.69 | MC |
| SRR1213694 | root | wt | 1.55 | MC |
| SRR4947479 | root | control | 3.31 | MC |
| SRR4947484 | root | Al | 4.57 | MC |
| SRR4947490 | root | Al | 0.81 | MC |
| SRR4947492 | root | Al | 0.62 | MC |
| SRR4947497 | root | control | 0.81 | MC |
| SRR4947499 | root | Al | 0.91 | MC |
| SRR4947501 | root | Al | 1.15 | MC |
| SRR4947504 | root | control | 0.85 | MC |
| SRR4947509 | root | Al | 5.25 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.72 | MC |
| SRR6502096 | root | control | 1.94 | MC |
| SRR6502106 | root | control | 1.37 | MC |
| SRR6502107 | root | control | 2.80 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.21 | MC |
| SRR6441554 | seedling | wild_type | 0.27 | MC |
| SRR6441555 | seedling | wild_type | 0.26 | MC |
| SRR2154086 | seedling | wt | 0.52 | MC |
| SRR2154084 | seedling | wt | 0.84 | MC |
| SRR2154087 | seedling | wt | 0.32 | MC |
| SRR3098741 | seedling | wt | 0.27 | MC |
| SRR3098742 | seedling | wt | 2.21 | MC |
| SRR3098743 | seedling | wt | 0.15 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.51 | MC |
| SRR358794 | seedling | wt | 0.66 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.53 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.64 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.47 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.01 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.44 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.36 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.31 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.13 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.98 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.46 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.27 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.30 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.62 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.56 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.62 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.60 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.68 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 0.69 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.25 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.12 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 3.83 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.41 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 3.93 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.53 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.82 | MC |